Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0913 ATGTGGATGGTGGGTTATAATGAAGGTGGTGAGTTCAACATGGCTGATTATGCATTCAATGGTAGGAAACTCAGGCCTCTCATGCCAAGGCCAGGAACTTCTCCTAACAACACTTCTTCAGCTACAACCACTCCTTGCTTAACCCGCATTCATCATGGCAATGATTTCTTTTCACAATATCACAACCTTGCATCAGTGGCAGAACAAGGAAAGAGAGAGTTCATGAATGCTCCACCAGTTGTGGTGAGCTCAAGGTGGAATCCAACACCAGAACAGCTAAGAGCACTTGAAGAATTGTATATGAGAGGGACAAGAACACCATCTGCTGAACAAATCCAACAAATCACTGCACAGCTTAGAAGGTTTGGCAAAATTGAAGGCAAGAACGTTTTCTATTGGTTTCAAAACCACAAAGCTAGAGAAAGACAAAAACGACGCCGTCAAATGGAATCAGCTGCTGAGGGGGGTCATCACCCCCGTGACTTTGACACTACTCTTGAGAAGAAAGACTTAGGCACAAGTAGGACAGTGTTTGAAGTTGAACAAACCAAGAACTGGGTACCCTCTACAAACTGCAGTAACCTTGCAGAGGAATCTGTCTCAATACAAAGGGCACCAAAAGCAACAGCAGTTTCAGAATTTACAACAGATGGATGGCTCCAATTCGATGAAGGAGAATTACAACAAAGAAGAAACTTTATGGAAAGGAATGCCAGTTGGCAAATGATGCAGTTACCTCCTCATTCTTCAACAGTTGTTGCACCTTACCTCATAAACACTCCTCTTAATACTTCTTCTGTAACAGCAAGGTTAATGGACCCAACAAGGCTCATTAAGAATCATGACCTCAGCTTCTTTATTTCACCTCACAGAGAATTAAGCAGTATCAACAACAACACTAATAAGGATATTATTGACAACTGTGCTGTGGAATCTCAAACCCTTCAACTTTTCCCTATAAGGAATGGAGATGGCAGCAGTGATAACATTAACCAACAGAAAGAGACAGACATATCAATTTCAGCAATGAATGCTCCTCCTCCTAGCCAGTTTTTTGAGTTCCTTCCATTGAAGAACTAA 1080 0.4185 MWMVGYNEGGEFNMADYAFNGRKLRPLMPRPGTSPNNTSSATTTPCLTRIHHGNDFFSQYHNLASVAEQGKREFMNAPPVVVSSRWNPTPEQLRALEELYMRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEGGHHPRDFDTTLEKKDLGTSRTVFEVEQTKNWVPSTNCSNLAEESVSIQRAPKATAVSEFTTDGWLQFDEGELQQRRNFMERNASWQMMQLPPHSSTVVAPYLINTPLNTSSVTARLMDPTRLIKNHDLSFFISPHRELSSINNNTNKDIIDNCAVESQTLQLFPIRNGDGSSDNINQQKETDISISAMNAPPPSQFFEFLPLKN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0913 359 Gene3D - 82 144 - -
Lal15g0913 359 SMART HOX_1 81 148 IPR001356 GO:0003677
Lal15g0913 359 MobiDBLite consensus disorder prediction 145 168 - -
Lal15g0913 359 PANTHER WUSCHEL, PUTATIVE-RELATED 11 359 - -
Lal15g0913 359 MobiDBLite consensus disorder prediction 142 168 - -
Lal15g0913 359 CDD homeodomain 85 145 IPR001356 GO:0003677
Lal15g0913 359 SUPERFAMILY Homeodomain-like 84 150 IPR009057 -
Lal15g0913 359 ProSiteProfiles 'Homeobox' domain profile. 89 144 IPR001356 GO:0003677
Lal15g0913 359 Pfam Homeodomain 84 143 IPR001356 GO:0003677
Lal15g0913 359 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 11 359 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0913 Lal-Chr15 6977475 6980096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0913 1 359 Wox Gene Family AT3G18010 41.495 4.90e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal15g0913 Homeodomain 1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0913 - - gmx:100777274 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0913 15 6977475 6980096 Lal16g0941 16 6250605 6253220 ECH
Lal15g0913 15 6977475 6980096 Lal15g0913 15 6977475 6980096 ECH
Lal16g0941 16 6250605 6253220 Lal15g0913 15 6977475 6980096 LSH