Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0907 ATGCAAAACCCATTCACCCTTTTCCTCTTCCTCCTTCTCCTCCCATTAGCAAAACCAGATCTAGCGTCACAACGCGCCGCATTACTCTCCCTCCGTTCCTCCGTTGCCGGCAGAACCCTTTTCTGGAACGCCACCAACCAAACGCCGTGTAATTGGGCCGGTGTCAAATGTGAACAAGACCGCGTCGTCGAGCTCCATCTTCCCGGAGTAGCACTTTCCGGCCAAATACCTACCGGAATATTCTCCAACTTAACTCACCTACGTACCCTCAGTCTCCGTTTCAATGCCCTCACCGGTAACATCCCTTCAGACCTCGCTTCATGCGTGAACCTCAGAAACCTTTACTTGCAGCGAAACCTTTTGTCTGGTTCAATCCCTCAGTTTCTCTTCGATTTACCAGACTTGGTTCGGGTTAATTTTGGGTTCAATAACTTATCGGGTCAGTTCTCGACCGGGTTTAATAACTTGACCCGGTTGAGAACTTTGTTTCTGGAAAATAACCAGCTTCAAGGTTCTATACCTGATTTGAATAACATTGTTAATCTTGAACAGTTTAATGTTTCCAATAACTTGCTTAATGGGTCTGTGCCGTTAAAGTTGCAGTCTTTTACTAAAGATTCGTTTTTGGGTAACTCTCTTTGTGGGAAACCACTAAGTTTGTGTCCTGGTGATGAAGGTGATAATGTTCCTTCTGGTGAAATTGGGAACAATGGGGAAAAGAAGAAGAAGAAATTATCTGGTGGTGCTATTGCTGGAATTGTAATTGGATCTGTGGTGGGTCTTTTGTTGGTTGTTTTTGTTTTGATTCTTTTGTGTGGGAAGAAGAGGAGCACCAAGAAAAGTAGCTCTGTTGATGTAGCAACTGTTAAGGATCGCGGATTGGAGGTTAATGGTGGTGAGAATAAGGTTAATGATGTGGAGAATGGTGGTCATGCAAATGGGAATGGATATCCGGTGGCTGCAACGGCGGCTGCTGTGTTGCGTGGCAACGGGAACAAGGGTAGTGAGGTTGTTAATGGTGGTGGAGCAAAAAAGTTGGTGTTTTTTGGGAATTCGGCGAGAGGGTTTGGTTTAGAGGATTTGCTTAGAGCTTCTGCTGAGGTTTTGGGAAAAGGGACTTTCGGGACAGCATATAAGGCAGTTTTGGATGTTGGTCCGGTGGTGGCTGTGAAAAGGTTGAAGGATGTGACTATTTCTGAGATGGAATTTAAGGAGAAGATTGAAGTGGTTGGAGCAATGGATAATGAGAATTTGGTTCCTCTAAGGGCTTACTATTTTAGCAGGGATGAGAAGCTGCTTGTGTATGATTACATGTCAATGGGAAGCTTGTCTGCACTTTTGCATGGAAACAAAGGAGCCGGTAGGACACCATTGAATTGGGAACACAGATCAGCCATTGCACTTAGAGCTGCTCGCGGCATTGAGTACCTACATTCACAAGGGCCTAATGTTTCTCATGGAAATATAAAGTCATCTAATGTCCTCCTAACCGAATCCTATGAAGCTAGAGTATCTGATTTTGGCCTTGCACAACTCGTTGGTCCCTCATCTACCCCAAACCGTGTTGCTGGCTACCGTGCCCCTGAGGTAACCGATCCCCGTAAAGTATCTCAAAAGGCAGATGTGTACAGCTTTGGTGTACTGCTCTTGGAACTTCTAACCGGGAAAGCACCTACTCATTCTCTCCTAAATGAAGAAGGAGTAGACCTCCCTAGATGGGTGCAATCTGTGGTTAGAGAAGAGTGGACGTCCGAGGTTTTCGATCTTGAGCTCCTTAGGTATCAAAATGTTGAAGAGGAGATGGTTCAATTGTTGCAACTTGCAGTTGATTGTGCAGAACAATACCCAGATAAGCGCCCTTCAATGTCCGAAGTAGCACAAAGCATCCAAGAGTTACGTCGTTCTAGCTTGAATGAGGATCAAGACCAAATCCAACATCATGATCTCATCAATGATATATAG 1962 0.4501 MQNPFTLFLFLLLLPLAKPDLASQRAALLSLRSSVAGRTLFWNATNQTPCNWAGVKCEQDRVVELHLPGVALSGQIPTGIFSNLTHLRTLSLRFNALTGNIPSDLASCVNLRNLYLQRNLLSGSIPQFLFDLPDLVRVNFGFNNLSGQFSTGFNNLTRLRTLFLENNQLQGSIPDLNNIVNLEQFNVSNNLLNGSVPLKLQSFTKDSFLGNSLCGKPLSLCPGDEGDNVPSGEIGNNGEKKKKKLSGGAIAGIVIGSVVGLLLVVFVLILLCGKKRSTKKSSSVDVATVKDRGLEVNGGENKVNDVENGGHANGNGYPVAATAAAVLRGNGNKGSEVVNGGGAKKLVFFGNSARGFGLEDLLRASAEVLGKGTFGTAYKAVLDVGPVVAVKRLKDVTISEMEFKEKIEVVGAMDNENLVPLRAYYFSRDEKLLVYDYMSMGSLSALLHGNKGAGRTPLNWEHRSAIALRAARGIEYLHSQGPNVSHGNIKSSNVLLTESYEARVSDFGLAQLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAEQYPDKRPSMSEVAQSIQELRRSSLNEDQDQIQHHDLINDI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0907 653 Pfam Leucine rich repeat N-terminal domain 22 57 IPR013210 -
Lal15g0907 653 ProSiteProfiles Protein kinase domain profile. 363 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0907 653 Gene3D Ribonuclease Inhibitor 135 221 IPR032675 -
Lal15g0907 653 Pfam Leucine rich repeat 75 121 IPR001611 GO:0005515
Lal15g0907 653 Gene3D Ribonuclease Inhibitor 23 132 IPR032675 -
Lal15g0907 653 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Lal15g0907 653 ProSiteProfiles Leucine-rich repeat profile. 158 180 IPR001611 GO:0005515
Lal15g0907 653 SUPERFAMILY L domain-like 31 203 - -
Lal15g0907 653 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 653 - -
Lal15g0907 653 PANTHER OS05G0588300 PROTEIN 4 653 - -
Lal15g0907 653 SUPERFAMILY Protein kinase-like (PK-like) 367 631 IPR011009 -
Lal15g0907 653 Gene3D Phosphorylase Kinase; domain 1 339 437 - -
Lal15g0907 653 Gene3D Transferase(Phosphotransferase) domain 1 438 652 - -
Lal15g0907 653 Pfam Protein kinase domain 366 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0907 Lal-Chr15 6874526 6878054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0907 20 648 Receptor kinase-like Gene Family AT1G48480 63.438 0.0 787
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal15g0907 Pkinase 1.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0907 - - gmx:100818955 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0907 15 6874526 6878054 Lal15g0907 15 6874526 6878054 ECH
Lal16g0927 16 6149320 6152248 Lal15g0907 15 6874526 6878054 LSH
Lal15g0907 15 6874526 6878054 Lal23g0706 23 9720184 9723345 LSH