Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0900 ATGGCAGAAACAAACTCGGTTGATATGATTTTGGACTTTCTGAGGAAGAACCGATTCACAAGAGCTGAGGCAGCATTGCGTAGTGAGATCAATAACCGTCCTGACTTAAATGGCTTCCTCCAAAAACTTGCGTTGGAAGAAAAGGCCTCACGTGATACACCACAAAATGATAAGGGGAAGCTGGCCGTAGAGATTCAGGGGGTGGGTTCTCGTGAAATCGTTGACGTTTCTAAAGAACTGATTGTGAAAGAAATAGAATGTGGGAGTGGTAGAAATGCAACTGAAACCAAGTGGAAAACTTCCGCTGCTTCTATAAGTGAACAGAATAAATTGGTTGGGACGAGTGACAAACACTTGACCTTTACTAAGAGTTTGGAGGACAGTATGCTTGATTTATACTCATTGAAGTCCTATCCCAGCAATGGTCCCATGGAGCCTTACCAAAATGATTCTCATAGTAGGGCTAATAATATTTTGAAGGCTTCTGTATCTGAACAGTCAAAATATCAAACTAATGAAGATGTTGCTTCAGTTGCAACCAACAGTAATGCTACACCTGGCGAGGAAACTACTGCATTTGCAGCTAATAAATCCTTGTGGCTTGGAAGTAGTAGTAAAGCGTCTGTGCAACCAAAGTATGACCTTGTGGTGCAAGGCAAAGAACTGAGGGAACATGATCTTCAGCAAAAATTTAATAGTTCATCTCTTAAAGTCAACTTTTCTGATAATCCCTGGTCTAGAACTGGTGAGAATATGAATTCATCTTCCGACCCATGGGATTGTTCTGTCAAGACTTTTTTTCCATTTCCGAAGGGGGATATGCCTACAAGCTTTGGTGGTACAGCTTATTCTGATAAAAATGAGGAAAAGAGACGGGTAGAAACTAGTGATATTAGGGCATCTATAAAAGAACAGGTGGATGAAGTAGGGAGAGCTATTTTCTTGGGCAAGTCACAAGGAAGTTCTGAACTGAAGAACATTGGCACCTTAAGTTTTCCTCTTGCGTCTGAAAATCAGAGGGAAGAGTTTCCTCGGCTTCCTCCTGTTAAACTCAAGTCAGAAGATAAGCCCTTGGCTGTTAACTGGGAGGAGAAGTTTGAGCGAGATGGACCGACTTCAACATTTTCTGGTGCAGACAGCACTTTATATATCGGTTCATATTTGGATGTGCCTATTGGGCAAGAAATTAACCCTTCAGGTATGAAGAGGGCTGCAGGGGGAAGCTGGTTGTCTGTAAGTCAAGGGATAGCAGAGGACACATCTGACGTTGTATCGGGTTTTGCTACAATTGGTGATGGGTTGTGTGAATCTGTAGACTTTCCGAATGAATATTGGGACTCTGATGAATATGATGATGATGATGATGTTGGGTACATGAGACAACCTATTGAGGATGAAGCCTGGTTTTTGGCGCATGAAATTGATTATCCTAGTGACAATGAAAAGGGGACTGTGCATGGAAGTGTTCCAGATCCTCATGAAAGTGGCCCTGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGAGAGCGGTATCTTCAAGTGAGTAATGTTGAACCAGTCACAGCTTCAGATGATCCCATTGGTCTAACAGTTACTGAAATGTATGGAAGGACTAATGATAATAATTTAATGGCTCAATATGATGGACAACTGATGGATGAAGAAGAATTGAATCTGATGCGTGGAGAACCTGTGTGGCAAGGCTTTGTCAATCAGACAAATGAACTCATCATGGTAGGAGATGGGAAGGTTTTGAATGATAGTGGAAGATCACGGCTAGATGATGTATGTATGGATGATGATCAATATGGTTCAGTGAGGTCTATTGGGGTGGGGATAAACAGTGATGCTGCAGATATTGGTAGTGAAGTGCATGAAAGTTTGGTTGGTGGTAGTAGTGAAGGGGATCTAGAATATTTCTGTGATCGTTATGTTGGAGCTGGTGGCTCAAGACACTCACATCATGATTTTGATAAGAATTCTATTAGTAAATCAATTAAAAATAAGAAGAAAAATGACAAGAGTCAGTCAAATAAACATGTCACCGGGGGTGGTAAGAATGCACAGTTGCATATGAAAACACATGGTGATGTGAACTTCTCATTTCCCCTATCTTCGAAAGATGACCAGATGGTTCAGGCTGCCTCTAAGCAGTCCCCGTGGCCAAGTAACTGTAATGCAGATGAAACTGATGACTGCCTTAATGCATTTGTGGGATCAGATGACATGCTTAATTCATGGAAGCGGAGGAGTAGTGATTCTTCACCCGTTAAAAGTTCTAGGGATGAGAATAATGCTAACCAAGTAAGATCCAGAAATTCTTCTCCAGCAACAGTCTCAAATTATGGATATTCTGAAAGAGAACATATCAAGCCAGAAGAGGATGAAAAGGTTGGCGTTGCACGGGAGGAAGATCTAGGGGCATCACTAGAGGATGAAGAGGCTGCTGCTGTGCAAGAGCAAGTAAGGCAAATAAAGGCCCAAGAAGAGGAATTTGAAACCTTCAATTTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTATTAGCTGGAAGGTATCATGTCACTGAGTATTTGGGATCTGCTGCGTTTAGCAAAGCTATACAAGCTCATGACCTGCACACAGGCATGGATGTCTGTGTAAAAATTATAAAGAACAACAAGGATTTTTTTGACCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCACGATCCTGGAGACAAGTATCACATTCTTCGATTGTATGATTATTTCTATTATCGAGAACATTTGTTGATAGTATGTGAACTACTTAAAGCGAACTTATATGAGTTTCATAAATTCAATAGAGAATCAGGGGGTGAAGTGTACTTCACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCATAGCCTCGGACTAATACATTGTGATTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTGATTTTGGGGCTTCCATATGATAAGAAGATTGATATCTGGTCACTTGGTTGCATCTTAGCTGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCAGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTCCAATTGATCAAAGTATGCTTGCAAAAGGACGAGATACATATAAGTACTTCACCAAAAATCATATGCTTTATGAACGGAATCAGGAAACCAACAGGTTAGAATACCTGCTTTCAAAAAAGACATCTTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGATTTTGTTGCTCATTTGCTTGAGATCAACCCGAAGAAGCGGCCTTCGGCATCCGATGCCCTAAAGCACCCATGGTTATCATACCCTTATGAACCCATATCATCTTGA 3558 0.4103 MAETNSVDMILDFLRKNRFTRAEAALRSEINNRPDLNGFLQKLALEEKASRDTPQNDKGKLAVEIQGVGSREIVDVSKELIVKEIECGSGRNATETKWKTSAASISEQNKLVGTSDKHLTFTKSLEDSMLDLYSLKSYPSNGPMEPYQNDSHSRANNILKASVSEQSKYQTNEDVASVATNSNATPGEETTAFAANKSLWLGSSSKASVQPKYDLVVQGKELREHDLQQKFNSSSLKVNFSDNPWSRTGENMNSSSDPWDCSVKTFFPFPKGDMPTSFGGTAYSDKNEEKRRVETSDIRASIKEQVDEVGRAIFLGKSQGSSELKNIGTLSFPLASENQREEFPRLPPVKLKSEDKPLAVNWEEKFERDGPTSTFSGADSTLYIGSYLDVPIGQEINPSGMKRAAGGSWLSVSQGIAEDTSDVVSGFATIGDGLCESVDFPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTVHGSVPDPHESGPAKDEDDDQSFAEEDSYFSGERYLQVSNVEPVTASDDPIGLTVTEMYGRTNDNNLMAQYDGQLMDEEELNLMRGEPVWQGFVNQTNELIMVGDGKVLNDSGRSRLDDVCMDDDQYGSVRSIGVGINSDAADIGSEVHESLVGGSSEGDLEYFCDRYVGAGGSRHSHHDFDKNSISKSIKNKKKNDKSQSNKHVTGGGKNAQLHMKTHGDVNFSFPLSSKDDQMVQAASKQSPWPSNCNADETDDCLNAFVGSDDMLNSWKRRSSDSSPVKSSRDENNANQVRSRNSSPATVSNYGYSEREHIKPEEDEKVGVAREEDLGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVLAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLLSKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSYPYEPISS 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0900 1185 MobiDBLite consensus disorder prediction 479 509 - -
Lal15g0900 1185 Gene3D Transferase(Phosphotransferase) domain 1 928 1176 - -
Lal15g0900 1185 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1183 - -
Lal15g0900 1185 ProSiteProfiles Protein kinase domain profile. 874 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0900 1185 MobiDBLite consensus disorder prediction 757 790 - -
Lal15g0900 1185 CDD PKc_DYRK_like 874 1176 - -
Lal15g0900 1185 SUPERFAMILY Protein kinase-like (PK-like) 863 1178 IPR011009 -
Lal15g0900 1185 MobiDBLite consensus disorder prediction 657 685 - -
Lal15g0900 1185 SMART serkin_6 874 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0900 1185 Coils Coil 826 846 - -
Lal15g0900 1185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1000 1012 IPR008271 GO:0004672|GO:0006468
Lal15g0900 1185 Pfam Protein kinase domain 874 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0900 1185 MobiDBLite consensus disorder prediction 657 699 - -
Lal15g0900 1185 Gene3D Phosphorylase Kinase; domain 1 868 955 - -
Lal15g0900 1185 MobiDBLite consensus disorder prediction 753 803 - -
Lal15g0900 1185 PANTHER - 2 1183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0900 Lal-Chr15 6766500 6778495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0900 873 1171 MAP Kinase Gene Family AT5G19010 31.034 4.40e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lal15g0900 Pkinase 3.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0900 - - lang:109331412 2062.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0918 16 6054597 6063464 Lal15g0900 15 6766500 6778495 LSH
Lal15g0900 15 6766500 6778495 Lal23g0714 23 9783775 9794048 LSH