Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0886 ATGATAATGGAAAGTGGAATGATAGAAGATGCATCAATAATAGGAGGGTTGATAGGGTTGCAATTTGTTTATGCTGGAAATGCTGTGTTGTTGAGTTATCTTATGTCTTTGGGTCTAAATTCTCTTACTATTGTCATTTTTAGTTCATTTGCTACATCCCTTGTTCTCATTCCTGTTGCTTTTTATTATGAAAGGAGTATATGGCCTAAGAAATTCAGTTTCAAGTTGTTTATACAAATACTCTTGCTTTCATTTGGAGGGGTAACTTTGTTCCAGTCTTTATTCCTTAAAGGAATCAATCTAACATCACCATCAATGGGAACTGCCATGCCAAATCTTGCCCCTGGTCTTATTTTCATTATCGCATTGACTTTCCGGATGGAGAAAGTGGATCTAAGGTGCACATATAGTAAAGTAAAAATCATTGGCACATTGCTTTGTGTCTTAGGGGCTCTCACAATGAGTGTAATGTCAAGCATTTCTGTTTCTGCACCAAATGAAGAGGCAACAGTTCAATTATTATCGTCTCCGCCACCGGATATTTTGTTTGATACACAGAAGATATTTGGCTGCCTCTATCTCTTAGCCGCAGTTTTCATATTTTCTAGCAACATTATCCTTCAGGCTTTTACTCTAGGAGATTTTCCTGCCCCGGTGTCCTTATGCGCGATAACGTCCTTTTTCGGTGCATGCATGACTGCAATAGCTCAATTACTTCAAGATCATGGATTCAAAACTAGTTGGCCACTTTTGAGTGTTGGAGACTTGATTGCTTACTCTCTTATGGCAGGCACTGTAAATGGAATATGCCTAAGTTTCCATGGTTGGGCACTTAAGAAGAGAGGTCCAGTTTTGGTGTCCATGTTCAGTCCCATTGGCACACTCTGCTCTGTCATTTTCTCCTATATTACCCTTGCTGATACCATTAACATTGGAAGCTTTGCAGGTATGATAGTCATGTTCACTGGTCTCTACTTTGTGCTTTGGGCCAAAGGGAAAGAAGGGTCTGCAAGTGAAAATGGCTTAGAAAGTGACTTTGATGCAGAGAAGCTTCTCTTAAGTTGA 1065 0.3962 MIMESGMIEDASIIGGLIGLQFVYAGNAVLLSYLMSLGLNSLTIVIFSSFATSLVLIPVAFYYERSIWPKKFSFKLFIQILLLSFGGVTLFQSLFLKGINLTSPSMGTAMPNLAPGLIFIIALTFRMEKVDLRCTYSKVKIIGTLLCVLGALTMSVMSSISVSAPNEEATVQLLSSPPPDILFDTQKIFGCLYLLAAVFIFSSNIILQAFTLGDFPAPVSLCAITSFFGACMTAIAQLLQDHGFKTSWPLLSVGDLIAYSLMAGTVNGICLSFHGWALKKRGPVLVSMFSPIGTLCSVIFSYITLADTINIGSFAGMIVMFTGLYFVLWAKGKEGSASENGLESDFDAEKLLLS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0886 354 PANTHER OS11G0588100 PROTEIN 11 354 - -
Lal15g0886 354 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020|GO:0016021
Lal15g0886 354 Pfam EamA-like transporter family 19 155 IPR000620 GO:0016020|GO:0016021
Lal15g0886 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 333 - -
Lal15g0886 354 PANTHER WAT1-RELATED PROTEIN 11 354 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0886 Lal-Chr15 6658928 6663088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0886 3 345 Nodulin-like Gene Family AT5G47470 55.233 1.92e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0886 - - gmx:100809182 535.028