Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal15g0885 | ATGGAACTACACAAATGCAAGCTTTGTTCAAGGTCTTTCTCCAATGGCAGAGCCCTTGGTGGCCACATGAAAGCTCACCTTGCTACCTTACCCATTCCTCCAAAGCCTCAAACTTTCCATCACCCTTTTGAATCTGCTTCATTCTCATATCAATCACAATCATCACAAGAAGAAGAACAACATGTTGTAGCATCACATGAAAAAGCAATGAGTTATGGTTTGAGGGGAAATCCTAAGAGAAGTTTAAGGTATGCAGATCCTGAATTCTCTTTTAGTAATAACAATGGGTTTGTTGTTGTTATTGCTGCTCAAGATAGAGAGAGTGAAAGTGAGTCAAAGAAACCAACTGGTCAAAGATCCAAAAGAAACAGAAAGTCAAGATTGTACAAGAGTTTGGAACAAGAACCTAAGAAACTCAAACCTAGTTTTTTGGAATCACCACCTTTGAGTTCTGTCTCTGACTTTTCACCTGAAGAAGATGTTGCTATGTGCCTTATGATGCTATCAAGGGATAAGTGGGAAAGTAATCTACTATTAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGAAGTTGAAGAAGAAGAGAATTGGTGTGAAGAATGAGTGTGAGAATTGTGGGAAAAAGTTTCGATCTTTTAGAGCATTGGAGAGTCATAGAAGTATATGTTGTAGTAATGAAGGTGATGGTGGAAGAAGTGACAAGATTTTTGAATGCCCTTTTTGTTTTAAGGTCTTTGGTTCAGGCCAAGCACTTGGTGGCCACAAAAGATCACATCTTATGCAAACTTCATCAACATCAATTGCTAATAGTAAAAAAGAGACCTTCATAGATCTCAACTTTCCTGCTCCTATAGAAGGAGAAGATGATCTTAGTATTGTTTCTGATGTCTCTAATGCATAA | 900 | 0.3778 | MELHKCKLCSRSFSNGRALGGHMKAHLATLPIPPKPQTFHHPFESASFSYQSQSSQEEEQHVVASHEKAMSYGLRGNPKRSLRYADPEFSFSNNNGFVVVIAAQDRESESESKKPTGQRSKRNRKSRLYKSLEQEPKKLKPSFLESPPLSSVSDFSPEEDVAMCLMMLSRDKWESNLLLEEEEEEEEEMKLKKKRIGVKNECENCGKKFRSFRALESHRSICCSNEGDGGRSDKIFECPFCFKVFGSGQALGGHKRSHLMQTSSTSIANSKKETFIDLNFPAPIEGEDDLSIVSDVSNA | 299 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal15g0885 | 299 | MobiDBLite | consensus disorder prediction | 105 | 151 | - | - | |
Lal15g0885 | 299 | Pfam | C2H2-type zinc finger | 201 | 219 | - | - | |
Lal15g0885 | 299 | Pfam | C2H2-type zinc finger | 4 | 28 | - | - | |
Lal15g0885 | 299 | Pfam | C2H2-type zinc finger | 236 | 259 | - | - | |
Lal15g0885 | 299 | Gene3D | Classic Zinc Finger | 175 | 261 | - | - | |
Lal15g0885 | 299 | SUPERFAMILY | beta-beta-alpha zinc fingers | 201 | 258 | IPR036236 | - | |
Lal15g0885 | 299 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 29 | IPR036236 | - | |
Lal15g0885 | 299 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 236 | 263 | IPR013087 | - | |
Lal15g0885 | 299 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 238 | 258 | IPR013087 | - | |
Lal15g0885 | 299 | Coils | Coil | 170 | 199 | - | - | |
Lal15g0885 | 299 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 26 | IPR013087 | - | |
Lal15g0885 | 299 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 1 | 295 | - | - | |
Lal15g0885 | 299 | PANTHER | ZINC FINGER PROTEIN ZAT1-RELATED | 1 | 295 | IPR044303 | GO:0006355 | |
Lal15g0885 | 299 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 4 | 31 | IPR013087 | - | |
Lal15g0885 | 299 | SMART | c2h2final6 | 4 | 26 | IPR013087 | - | |
Lal15g0885 | 299 | SMART | c2h2final6 | 236 | 258 | IPR013087 | - | |
Lal15g0885 | 299 | SMART | c2h2final6 | 200 | 220 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal15g0885 | Lal-Chr15 | 6655922 | 6656821 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal15g0885 | 1 | 293 | C2H2 Transcription Factor Family | AT3G60580 | 34.675 | 1.89e-43 | 148 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Lal15g0885 | zf-C2H2_6 | 2.2e-09 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal15g0885 | - | - | gmx:100811637 | 295.434 |