Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0879 ATGATCATTTCTCGATTCCTCAAAACCCTAATTCCAATTTCCACTACTTCATTTTCCATACTGAAACCTATTCGTTCCACTTTTATTCGAACCATGAGTTCCGGTCTAGTCTTTCAACTCAAGCTTCACCCTCTCACCGGTAACTCTGAATGGGTCGTTATTCAAGAAGACCAAAACGACGACGTTCAACAACCCCTTCTTGCTACGACGTCGTATTTGGACATGCTCAACGATTCCGCTAGAAATAGAGCGTATCGTCAAGCCATTGAAAAAACCATTACTAAACCTTCCCATGTTCTCGATATCGGTGCTGGAACTGGGTTACTATCGATGATGGCTGCACAGGCTATGGGCAGCGAAGGAAGAGTGACGGCGTGCGAGTCTTACCTTCCGATGGTGAAGTTGATGAAGAAAGTGATGCGAGTTAATGGAATGGAAGGAAGAATCAGAGTGATCAATAAGCGCTCTGATGAACTCCAAGTTGGTGTTGATATTCCTTCACGTGCAGATGTACTTGTAAGTGAGATATTAGACTCAGAATTACTGGGTGAGGGGCTTATACCAACCTTACAACATGCGCATGACAATTTGTTGTCGGAAAACCCTCTGACTGTGCCCTATCGAGCAACTACTTATGGACAGCTGGTTGAAAGCTCATTCTTAAGGCAGCTGCATGATTTACATAACAATGAGGCTAGTGTGCCTGATGGCATTCGTCTTACCCCTCCAGGGCTTGAAGGTGTTTTAAGTGTCAAAGGTCAGCAATATGCCATGCATTGTGATCCAATAAGAAAAGAAATAAAGCTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTCGAAACGGCCAGAGAGTTATGGAGAAACTGAGCTGTGCGCGAAGGCAACTGATGATGGTAGAGTTCATGCTGTGGTCTCATGGTGGGTACTTCAACTTGATCGTGAAGGGATAATCTATTACTCAACTGCTCCTAGGTGGATAAGCTCACCAACAACTACAAGTCCTATTGGTTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAGGGAATGGAATTTCGATATCCAAAGGAGAAGAAATTTGTTTACATGCTACACATACCGATACAAGTATCTCATATAATTTTGATACCCAAGTGTCAACAAGTGAGGTTTCTCATCATGGGATGACAGCTGAAAATTTTCAGCTTGTACTGTCACCAGAAAGGGCTGCAATCTATGGAGACAAAGCATGGAGGCTTTCAATGTTGAAAGCGGTGGAAAGTGTGTTGCAGGGAAGAGTCCGCCCATTATGCTTGGTTGCGGATGATAGTGTTTTTTTACCACTTCTTGTAGCACATCTTTCAGAAGCATCACATGTAATTTCGTTACTTCCAGGGCTGAAGGAAAGGGGCCTCCAGTATTTGCAAGGTGTTGCTCATGATAATCATTTGTCACCTAATCGCATAGAAGTTCTTGGAAAAAGGGCTAAACAATTAACTTTAGATGATACAGACCAGAAAAAGGTTGATCTGTTAATAGCAGAACCTTTCTATTTCGGAAATGATGGCATGCTTCCATGGCAGAACCTTCGGTTTTGGAAGGATCGTACTTCACTTGATTCTATCCTCTCTGAAGATGCTCTCATAATTCCTAGTAAAGGAATATTGAAGGCATGCACCATCTCTCTACCTGATCTTTGGAAAAGTCGTTGCTGCTTGGGTAAGATAGAAGGTTTTGACCATTCAGTGGTAAATGGCACGTTGGGGGCTTGCGGTAATCTACCTGACACAGAAGAGGGTCCTTGCCTGCCTTTCTTTGTCTGGCAGTGTGGAGAGTACGATGTGCTTAGTGAGACATTCGATGTGATGGAGTTTGATTTCTCAAAACAAATATGTCAATGTGAAGGAAAATCCCAGGTTAATTTCACCAAGAGTGGGGTATGCCATGGGTTTGTGCTATGGATTGACTGGGTGATGGATTTGCAAAACTCTGTTGTTATATCAACTGGTCCAGACAAGAGATATTGGAAGCAGGGAGTAAAGCTTCTTGCAACACCTAGAACTGTAGAGCCGGAAAGATCGAAAAATGCTCAAGCATGTTGTTCTGCAGTACTTGAAGCAAAATTTGATCCCTCAAATGGAGACCTCAAAATTGTACATGAATTCTTATGA 2163 0.4263 MIISRFLKTLIPISTTSFSILKPIRSTFIRTMSSGLVFQLKLHPLTGNSEWVVIQEDQNDDVQQPLLATTSYLDMLNDSARNRAYRQAIEKTITKPSHVLDIGAGTGLLSMMAAQAMGSEGRVTACESYLPMVKLMKKVMRVNGMEGRIRVINKRSDELQVGVDIPSRADVLVSEILDSELLGEGLIPTLQHAHDNLLSENPLTVPYRATTYGQLVESSFLRQLHDLHNNEASVPDGIRLTPPGLEGVLSVKGQQYAMHCDPIRKEIKLLSEPFKIFEFDFSKRPESYGETELCAKATDDGRVHAVVSWWVLQLDREGIIYYSTAPRWISSPTTTSPIGWCDHWKQCVWFVPGNGISISKGEEICLHATHTDTSISYNFDTQVSTSEVSHHGMTAENFQLVLSPERAAIYGDKAWRLSMLKAVESVLQGRVRPLCLVADDSVFLPLLVAHLSEASHVISLLPGLKERGLQYLQGVAHDNHLSPNRIEVLGKRAKQLTLDDTDQKKVDLLIAEPFYFGNDGMLPWQNLRFWKDRTSLDSILSEDALIIPSKGILKACTISLPDLWKSRCCLGKIEGFDHSVVNGTLGACGNLPDTEEGPCLPFFVWQCGEYDVLSETFDVMEFDFSKQICQCEGKSQVNFTKSGVCHGFVLWIDWVMDLQNSVVISTGPDKRYWKQGVKLLATPRTVEPERSKNAQACCSAVLEAKFDPSNGDLKIVHEFL 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0879 720 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 7 39 660 - -
Lal15g0879 720 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 39 660 IPR025799 GO:0016274|GO:0018216
Lal15g0879 720 Gene3D Vaccinia Virus protein VP39 65 207 IPR029063 -
Lal15g0879 720 Gene3D - 552 719 - -
Lal15g0879 720 CDD AdoMet_MTases 99 174 - -
Lal15g0879 720 Gene3D Vaccinia Virus protein VP39 399 548 IPR029063 -
Lal15g0879 720 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 72 389 IPR029063 -
Lal15g0879 720 PIRSF Arg_N-mtase 36 719 IPR014644 GO:0006479|GO:0008168
Lal15g0879 720 Gene3D - 208 394 - -
Lal15g0879 720 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 48 380 IPR025799 GO:0016274|GO:0018216
Lal15g0879 720 Pfam Ribosomal protein L11 methyltransferase (PrmA) 87 179 - -
Lal15g0879 720 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 381 720 IPR025799 GO:0016274|GO:0018216
Lal15g0879 720 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 469 689 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0879 Lal-Chr15 6622410 6628717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0879 72 212 C2H2 Transcription Factor Family AT3G12270 34.667 5.96e-14 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0879 15 6622410 6628717 Lal15g0879 15 6622410 6628717 ECH