Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0876 ATGGAATATGGAAGAGGAGGAGGTGGGTCCCACTCCCCCGGAGAGCACCATCAACATGACCATGATGATGGTTCTGATTCCCAGAGGAGGAATAAACGTTACCATCGTCATACTTCTAATCAAATTCAAAGGCTTGAATCAATGTTCAAAGAGTGCCCACATCCTGATGAGAAGCAAAGGATGCAGCTAAGCAGGGAACTAGGTCTAGCACCTAGACAAATCAAATTTTGGTTCCAAAATAGAAGGACCCAACTGAAGGCACAACATGAGAGGCAAGATAACTCTACACTGCGATCAGAGAATGACAAGATACGTTGTGAAAACATTGCTTTTAGGGAGGCCTTGAAAAATTGTGTATGCCCTAATTGTGGTCCAGCTCCTCTCAATGAAGATTCTTATTTTGATGATCAAAAGATGAGATTAGAGAATCTTCACCTCAAAGAAGAGCTTGATAGAGTGTCTAGCATTGCAGCAAAGTACATAGGAAGACCAATTTCTCAACTCCCTTCAATTCTACCTATTCATATGTCCCCTCTAGAATTGTCTATGGGGACTAGTCCTTTTGGAATCCAACAAGGACTGTTTGGCATTGGTGCTGACATTGGTTCTTCTCTTGATCTAGATCTTCTACAAGGGACTTGTTCTAATTCTATGCCAAATTTTCCATATCAACCTGGTTCCCTTTCAGAAATGGATAAGTCTCATATGTCAACTATTGCTACAAATGCCCTAGAAGAATTTCTCAGGCTCTTGCACACAAATGATCCCTTATGGATCAAGTCTACTACCGATGGAAAAGATGTTCTTAATCTTGAGATATATGAAAGAATGTTCCCCAAGACAAATACTCACCTCAAGAATCCTAATTTTCGCGTTGAAGCGTCAAGAGATTCAGTCATTGTTATGATGAATAGCTCAAATTTGGCTGAAATGTTCATGGATGCTAACAAATGGAGGGAACTTTTTTCTACTATTGTTTCAGCTGCAAGAACAATTGAGGTTCTATCATCAGGTATCATGGGTGGTAACAGTGGTTCATTGCAACTGATGTATGAAGAGTTACAAGTGTTGTCTCCACATGTTTCTACTCGAGAGTTCTACTTCCTTCGTTATTTGCAACAAATTGAGCAGGGAACATGGGCAATAGTTGATGTTTCATATGATTTTCCACAAGACAACCAATTTGCTCCACAATTTCCCTCTCACCGTTTTCCTTCTGGGTGTTTAATTCAAGACTTCTCAAATGGGCAGTCCAAGGTTACATGGATTGAACATGTAGAGGTTGAAGACAAAACTCTTCCCCATAGGTTTTTCAGAAACTTGATATATAGTGGATTAGCATTTGGGTCAGAAAGATGGGTTGCTACACTTCAGAGAACATGTGAAAGAATTGCTTGCCTAATGGTTACACCAAACCCTACACGTGATCTTGGAGGAGCTATAACATCACCTGAGGGGAAGAGAAGCACGATGAAACTTTCTCAAAGGATGGTGACAAGTTTTTGTGCCAATATTAGCACATCAAATGGTCAAAAATGGACCATACTCTCTGGGTTAGATGAGGTTGGAGTCAGAGTCTCTATCCATAAAAGCACAGATCCTGGACAACCTAATGGTGTGGTTCTAAGTGCTGCCACTACCATTTGGGTCCCTATCCCTCCACACATTGTGTTCAATTTTTTCAAGGATGATAGAAAAAGACCTCAGTGGGATGTTCTTTCCAATGGTAATCCTGTGCAAGAGGTTGCACACATAGCAAATGGTTCTCACCCTGGTAACCGAATATCGATTCTTAGAGCTTTCAATACTACTCAGAACAACAACATGTTAATACTACAAGAGAGTTGCATTGATTCTTCTGGTGCAATTGTGGTATATTGCCCAGTTGATCTTCCATCCATGAATATAGCAATGAATGGTGAAGACCCTTCATACATTCCCTTATTACCATCTGGATTTTCAATTTCCCATGATGGCCAACATGACCAAGGAGGAGTAGATGGAGGAGTAGATGGAGGAGCATCAACAAGCTCAAACACAAGCACAAACATAGGTAGATGTGGTGGTTCACTTGTCACAGTTGCATTTCAAATCCTAGTGAGTAATTTGCCATCAGCAAAACTCAACATGGATTCAGTAACAACTGTTAATAATCTTATTAGCACCACTATCCATCAAATTAAGGCTTCATTGAATTGCCCTATTGGGACTTTGAATGCCTTGTCATCAAGAGTGGAAGGCAAATTATTTAATTTTCTTAAGTATGATAATGATGGATTGGTGAGAGAGATAGTTTTAAGATTAGATAGTCAAGAGCGTAGTACTATGACTATGTAG 2337 0.4005 MEYGRGGGGSHSPGEHHQHDHDDGSDSQRRNKRYHRHTSNQIQRLESMFKECPHPDEKQRMQLSRELGLAPRQIKFWFQNRRTQLKAQHERQDNSTLRSENDKIRCENIAFREALKNCVCPNCGPAPLNEDSYFDDQKMRLENLHLKEELDRVSSIAAKYIGRPISQLPSILPIHMSPLELSMGTSPFGIQQGLFGIGADIGSSLDLDLLQGTCSNSMPNFPYQPGSLSEMDKSHMSTIATNALEEFLRLLHTNDPLWIKSTTDGKDVLNLEIYERMFPKTNTHLKNPNFRVEASRDSVIVMMNSSNLAEMFMDANKWRELFSTIVSAARTIEVLSSGIMGGNSGSLQLMYEELQVLSPHVSTREFYFLRYLQQIEQGTWAIVDVSYDFPQDNQFAPQFPSHRFPSGCLIQDFSNGQSKVTWIEHVEVEDKTLPHRFFRNLIYSGLAFGSERWVATLQRTCERIACLMVTPNPTRDLGGAITSPEGKRSTMKLSQRMVTSFCANISTSNGQKWTILSGLDEVGVRVSIHKSTDPGQPNGVVLSAATTIWVPIPPHIVFNFFKDDRKRPQWDVLSNGNPVQEVAHIANGSHPGNRISILRAFNTTQNNNMLILQESCIDSSGAIVVYCPVDLPSMNIAMNGEDPSYIPLLPSGFSISHDGQHDQGGVDGGVDGGASTSSNTSTNIGRCGGSLVTVAFQILVSNLPSAKLNMDSVTTVNNLISTTIHQIKASLNCPIGTLNALSSRVEGKLFNFLKYDNDGLVREIVLRLDSQERSTMTM 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0876 778 MobiDBLite consensus disorder prediction 1 40 - -
Lal15g0876 778 SMART HOX_1 29 92 IPR001356 GO:0003677
Lal15g0876 778 Gene3D - 236 457 IPR023393 -
Lal15g0876 778 ProSiteProfiles 'Homeobox' domain profile. 28 88 IPR001356 GO:0003677
Lal15g0876 778 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 9 734 - -
Lal15g0876 778 SUPERFAMILY Homeodomain-like 11 88 IPR009057 -
Lal15g0876 778 SMART START_1 238 463 IPR002913 GO:0008289
Lal15g0876 778 MobiDBLite consensus disorder prediction 660 681 - -
Lal15g0876 778 SUPERFAMILY Bet v1-like 230 464 - -
Lal15g0876 778 Pfam Homeodomain 32 86 IPR001356 GO:0003677
Lal15g0876 778 CDD START_ArGLABRA2_like 233 462 - -
Lal15g0876 778 ProSiteProfiles START domain profile. 229 466 IPR002913 GO:0008289
Lal15g0876 778 SUPERFAMILY Bet v1-like 484 728 - -
Lal15g0876 778 MobiDBLite consensus disorder prediction 12 30 - -
Lal15g0876 778 ProSitePatterns 'Homeobox' domain signature. 63 86 IPR017970 GO:0000981|GO:0006355
Lal15g0876 778 CDD homeodomain 32 89 IPR001356 GO:0003677
Lal15g0876 778 Pfam START domain 239 463 IPR002913 GO:0008289
Lal15g0876 778 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 9 734 IPR042160 -
Lal15g0876 778 Gene3D - 15 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0876 Lal-Chr15 6593663 6598011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0876 26 740 Homeobox Transcription Factor Family AT1G73360 60.996 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal15g0876 START 5.4e-44 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0876 K09338 - gmx:100785023 1062.37