Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0820 ATGGCTCGTTTGGATTTAGGAACTGCTTCACGCTTTTTTCAAAACCTTCACAGACCAGACTTGCACCTTCAGCAACATCACCACCAAGATTCCGAAGAACAAGAACGTCACAATCATCACCAACAACATCTCGGTGCAGATGCAAGTGCTTTTTCCACTGAAGAAGATGATCAGAGCCAAGGTCTGGAGATGGGGTCGGCTTCAGGCGGCGGCACTGGCGATGTCATAGGTCGCCGCCCACGAGGCCGACCCCCTGGCTCCAAGAACAAGGCAAAGCCTCCGGTGATTATAACAAGAGAAAGTGCCAACACTCTGAGGGCACATATTCTCGAGGTAGGTAGCGGCACAGACATATTTGATTGTGTAGCTACCTATGCACGCCGGCGCCAGCGGGGGATTTGCATCCTGAGCGGCAACGGCACTGTCACTAATGTGACCCTCAGGCAGCCATCGGCTGCAGGAGCCGTGGTCACACTCCAAGGAAGATTTGAGATATTATCCCTCTCCGGATCCTTTTTGCCGCCACCAGCTCCCCCGGGCGCTACCAGTCTCACCATCTACCTTGCCGGAGGGCAAGGGCAGGTGGTGGGAGGTAGCGTTGTGGGAGAATTGATGGCGGCAGGACCGGTCATAGTCATTGCTGCCTCGTTTACCAACGTGGCTTATGAGAGGTTGCCGTTGGAGGAAGATGAGCAACAGCTTCAGATGCAGCCACCAGTTTCTCAGGGTTCTGTTGGTGGTATTGGGAATAATCCGTTTTCGGATCCATCTTCTGGTTTTCCTTTCTTCAATTTTCCGTTGAATATACAAAATAATGTTCAGATGCCAGTGGATGGTTGGGCTGGAAACTCAGTAATAGATTCTTATACCAAGAGCAAATGGTTTCATTCCCATGGAGTTTTTCTTGCTAATTATGCTCAGCAATCATATACCTATAAAACAGCTTTGCTTGAATAA 957 0.5016 MARLDLGTASRFFQNLHRPDLHLQQHHHQDSEEQERHNHHQQHLGADASAFSTEEDDQSQGLEMGSASGGGTGDVIGRRPRGRPPGSKNKAKPPVIITRESANTLRAHILEVGSGTDIFDCVATYARRRQRGICILSGNGTVTNVTLRQPSAAGAVVTLQGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELMAAGPVIVIAASFTNVAYERLPLEEDEQQLQMQPPVSQGSVGGIGNNPFSDPSSGFPFFNFPLNIQNNVQMPVDGWAGNSVIDSYTKSKWFHSHGVFLANYAQQSYTYKTALLE 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0820 318 MobiDBLite consensus disorder prediction 50 66 - -
Lal15g0820 318 SUPERFAMILY AF0104/ALDC/Ptd012-like 102 234 - -
Lal15g0820 318 Gene3D - 105 238 - -
Lal15g0820 318 ProSiteProfiles PPC domain profile profile. 102 238 IPR005175 -
Lal15g0820 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 1 285 - -
Lal15g0820 318 MobiDBLite consensus disorder prediction 50 94 - -
Lal15g0820 318 Pfam Plants and Prokaryotes Conserved (PCC) domain 106 219 IPR005175 -
Lal15g0820 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 285 IPR014476 GO:0003680
Lal15g0820 318 MobiDBLite consensus disorder prediction 24 43 - -
Lal15g0820 318 CDD DUF296 106 189 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0820 Lal-Chr15 6038258 6039818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0820 1 284 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 64.935 4.45e-100 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0820 - - pvu:PHAVU_003G230600g 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0820 15 6038258 6039818 Lal15g0820 15 6038258 6039818 ECH
Lal15g0820 15 6038258 6039818 Lal23g1271 23 13800978 13802998 LSH
Lal15g0820 15 6038258 6039818 Lal23g0783 23 10348300 10350534 LSH
Lal15g0820 15 6038258 6039818 Lal15g0820 15 6038258 6039818 PCT
Lal15g0820 15 6038258 6039818 Lal23g0783 23 10348300 10350534 PCT
Lal23g1271 23 13800978 13802998 Lal15g0820 15 6038258 6039818 PCT
Lal15g0820 15 6038258 6039818 Lal23g1271 23 13800978 13802998 PCT
Lal23g0783 23 10348300 10350534 Lal15g0820 15 6038258 6039818 PCT