Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0818 ATGGCTGCAGAGATTGGCTTTCTCTCCTTGACTCAGATCCAAATATTGTCACAATCCCAACACCACCATCTAAATCATCAAAATCAACCTCATCATCAACCAAACCCTAACATCACAAACACATCATCATCAACAACAACTTTGATGTGGAATCCCAGAGTATACCAAGAAGAAGAAGATGACTCATGGGAAGTTAGAGCCTTTGCAGAAGACACCAACAACATCATGGGTACTACTTGGCCTCCAAGGTCCTATACCTGCACCTTTTGTAGAAGGGAGTTCCGTTCAGCACAAGCTCTTGGTGGCCACATGAACGTGCACCGCCGCGACCGTGCTCGTCTCCACCACCACCCTCCGTTCAACACCACCACCACCACATCCCCCTCATTCATCAATATCCCACCTCATGACCTTGTTGCAAATGGTGGCATGTGCTTCCTCTCCCATTTGCCTAACCCTAATACCAATAGCACTGCTCCATTGTTCTCCACTCCTCTAAATGCATGTGGTAAATCAACACCTTCCAATACTCTTCTTAATGGCTCATATTATCCACCAAATTCTTTGGGTCAAAGGAGTGTGCACAACATAGCAGAAGAAACAGCACAAATAAAGGGTAAAGATAAACCTTTCTCATCGCTTGAAAGAATCTGTGAGGAGCGAAATATACGGGAAGCCATGTCAACCTACCCAAATTCCTTTGATTTCACAATGGCTCAGGTATCTAGCAATGATTTTTCTTCTTCCTTTTATAGAAGCTCTAGCAAAGTGGAAGAACCCACAACTTCTTCCACTAATCAAGGCCATCATGAAGAACTTGATCTAGAGCTCAGGTTGGGGCACAGATCAACACCAACATGA 861 0.4448 MAAEIGFLSLTQIQILSQSQHHHLNHQNQPHHQPNPNITNTSSSTTTLMWNPRVYQEEEDDSWEVRAFAEDTNNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHHPPFNTTTTTSPSFINIPPHDLVANGGMCFLSHLPNPNTNSTAPLFSTPLNACGKSTPSNTLLNGSYYPPNSLGQRSVHNIAEETAQIKGKDKPFSSLERICEERNIREAMSTYPNSFDFTMAQVSSNDFSSSFYRSSSKVEEPTTSSTNQGHHEELDLELRLGHRSTPT 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0818 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Lal15g0818 286 PANTHER OS07G0101800 PROTEIN 49 282 - -
Lal15g0818 286 SUPERFAMILY beta-beta-alpha zinc fingers 82 112 IPR036236 -
Lal15g0818 286 MobiDBLite consensus disorder prediction 248 268 - -
Lal15g0818 286 PANTHER OS07G0101800 PROTEIN 49 282 - -
Lal15g0818 286 SMART c2h2final6 85 107 IPR013087 -
Lal15g0818 286 MobiDBLite consensus disorder prediction 19 45 - -
Lal15g0818 286 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Lal15g0818 286 Pfam C2H2-type zinc finger 85 109 - -
Lal15g0818 286 MobiDBLite consensus disorder prediction 248 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0818 Lal-Chr15 6005998 6006858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0818 49 281 C2H2 Transcription Factor Family AT4G17810 37.712 3.75e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal15g0818 zf-C2H2_6 6.3e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0818 - - gmx:100790748 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0818 15 6005998 6006858 Lal15g0818 15 6005998 6006858 ECH
Lal16g0282 16 1685948 1686679 Lal15g0818 15 6005998 6006858 LSH
Lal15g0818 15 6005998 6006858 Lal15g1311 15 15032691 15036734 PCT
Lal15g1311 15 15032691 15036734 Lal15g0818 15 6005998 6006858 PCT