Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0796 ATGGATCTAAAAAATGTGCAAAACCAAAGCATGCGTTTGGTTCTATCCACTGATACCAAGCCTAGGATGAAATGGACTCCTGAGCTTCACCAAAGATTCATTGACGCAATTAATCAACTTGGAGGTGTAGAAAAGGCTACCCCAAAGAGTCTTATGAGGGTGATGGGTATTCCAGGACTAACTTTACTTGGGAAAAGCCCTCACATGGAAACCTCTTCTGACAACAAACAAGATCATATAGAAATCAACAACAGTTATGGTCATTACAGTAGGGAAACCAGTACTGAAAACCAGAATCAAACAACTGAAACCATGCAGATTTCTCAGGCTCTCCAAATGCAAATGGAAGTACAAAGTAAACTTTATGAACAAACTGAGGTTCAGAAACATATGCAGCTTAGAATTGAAGCTCAAGGGAAGTATTTGCAATCAGTATTAAAAAAGGCACAAGAAGCATTAACAGGATACAATTTTTCTACACTTGATGTAGAAGTTGCCAAAGCTGAACTTTCTCACTTAGTATCAACAAGAGGGTTTAATTTAAACTGTGATGAGAGGAAACAAAATAGAAGAACTATGTGTTCCATGGAAAGTTCTTTGACATATTCTGAAAGCTCAGAAGGAGAAGAAAATCAGATTTTGTATCATGAGTCAGAGAAGCTTCAAAAGTCTAATACTGCTTTAGTTGAATTTCCATTATTGGCCATTCAACTAGAAAATACTAGGGATGGAGCTAGTGAGAAAAAGAGAAGTGCAGAAACTAGTTCTGAGGGTATCTGTGTTGATCAACCTTCTGAGAAAAGATGCTGCATCAAGTTGAGGAAATCAGAAATGTTAGAAATAATTGATTTGAACAGCTAG 861 0.3705 MDLKNVQNQSMRLVLSTDTKPRMKWTPELHQRFIDAINQLGGVEKATPKSLMRVMGIPGLTLLGKSPHMETSSDNKQDHIEINNSYGHYSRETSTENQNQTTETMQISQALQMQMEVQSKLYEQTEVQKHMQLRIEAQGKYLQSVLKKAQEALTGYNFSTLDVEVAKAELSHLVSTRGFNLNCDERKQNRRTMCSMESSLTYSESSEGEENQILYHESEKLQKSNTALVEFPLLAIQLENTRDGASEKKRSAETSSEGICVDQPSEKRCCIKLRKSEMLEIIDLNS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0796 286 Gene3D - 19 69 - -
Lal15g0796 286 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 286 - -
Lal15g0796 286 Pfam MYB-CC type transfactor, LHEQLE motif 105 151 IPR025756 -
Lal15g0796 286 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 286 IPR044848 GO:0003700
Lal15g0796 286 Coils Coil 284 286 - -
Lal15g0796 286 SUPERFAMILY Homeodomain-like 19 62 IPR009057 -
Lal15g0796 286 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 61 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0796 Lal-Chr15 5815031 5816700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0796 11 268 G2-like Transcription Factor Family AT1G69580 41.695 1.73e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lal15g0796 Myb_CC_LHEQLE 1.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0796 - - lang:109340795 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0796 15 5815031 5816700 Lal15g0796 15 5815031 5816700 ECH
Lal16g0830 16 5360538 5365033 Lal15g0796 15 5815031 5816700 LSH