Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0787 ATGAGCTCCAGCGGCGGCGAATCATTATCTTCCGATAAGCAAAAGGAGAAGGCTAGAGTGAGCCGCACCTCCTTGATACAGTGGCACGCTCACCAAAACGACTCCGCTTCTGTCCGCAAACTCTTGCAAGAAGATCCATCTCTTGTTAATGCCACAGATTACGATAACCGTACTCCGCTCCATGTGGCCTCCCTCCACGGCTGGCTCGACGTCGCTAACTGCTTAATCGAATTCGGCGCTGATGTCAACGCTCAAGATCGTTGGAAAAACACTCCTCTTGCTGATGCGGAAGGAGCTAAAAGAAATAGCGTGATCCAGCTTTTGAAAAAACATGGAGGCTTATCTTATGGTCAAAATGGGAGCCATTTCGAACCCAACACTGTTCCGCCGCCATTGCCTAACAAGTGTGATTGGGAAGTTGACCCTTCTGAGCTTGACTTCTCTAATTCAGCACGTATTGGAAAGATATTGTTCTTTATTTCTGTTTGTCGTAGTGAGGGTGAGCCTCGCTGCAACGGAAAGATGTTGCTTAGTGACCAAGTAGTCATGGGTTCAAATTCTGTGGAAACAACCTCTTTGCTTGGATCTTTCGGTGAGATTTTAAAAGCCCATTGGCGTGGAACTCCAGTTGCTGTCAAACGCATCCTTCCCTCCCTTTCAGAAGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGTTAGTAAAGCTTCGACACCCCAATATAGTTCAGTTTCTTGGAGCTGTTACTGATAGGAAGCCTCTTATGTTAATTACCGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGAAAAAGGTTCACTTAATACTGCAGCCGCTATCAACTTTTCCATGGATATTGCCAGAGGAATGGCTTATCTTCATAATGAACCGAATGTTATAATTCACCGAGACCTGAAGCCAAGGAATGTTCTTTTAGTCAATTCTAGTGCCGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAGCTTATTAAGGTCCAAAGTTCTCATGATGTATACAAGATGACCGGTGAAACTGGAAGCTGTGAGTATTCTTTTAAGTTCTTTCAAAATAAGATTAGTCATTTGTGCGCAAAACTCAATTTAATTTGCTTGTTCTTGAGGATAAAAAAAGACCGCTACATGGCTCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGATGTGTTCTCTTTTGCAATGATTCTATATGAGATGCTTGAAGGTGAACCACCTTTTGCAAATTATGAACCTCTTGATGGAGCCAAACTAGCAGCAGAAGGACACAGACCGACTATTCGTGCAAAGGGATATACCCCTGAACTGATAGAGTTAACAGAGCAGTGTTGGGCTGCAGACATGAATCAAAGACCTTCCTTCATAGATATCCTTAAACGCCTTGAGAAGATTAAGGAAAACTTGCCATCAGATCATCACTGGCACTTGTTCTCTTCATAA 1479 0.43 MSSSGGESLSSDKQKEKARVSRTSLIQWHAHQNDSASVRKLLQEDPSLVNATDYDNRTPLHVASLHGWLDVANCLIEFGADVNAQDRWKNTPLADAEGAKRNSVIQLLKKHGGLSYGQNGSHFEPNTVPPPLPNKCDWEVDPSELDFSNSARIGKILFFISVCRSEGEPRCNGKMLLSDQVVMGSNSVETTSLLGSFGEILKAHWRGTPVAVKRILPSLSEDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRKPLMLITEYLRGGDLHQYLKEKGSLNTAAAINFSMDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQSSHDVYKMTGETGSCEYSFKFFQNKISHLCAKLNLICLFLRIKKDRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFANYEPLDGAKLAAEGHRPTIRAKGYTPELIELTEQCWAADMNQRPSFIDILKRLEKIKENLPSDHHWHLFSS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0787 492 Gene3D Phosphorylase Kinase; domain 1 188 265 - -
Lal15g0787 492 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 158 - -
Lal15g0787 492 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 194 356 - -
Lal15g0787 492 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 382 484 - -
Lal15g0787 492 ProSiteProfiles Protein kinase domain profile. 186 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0787 492 Gene3D Transferase(Phosphotransferase) domain 1 266 488 - -
Lal15g0787 492 SMART serkin_6 188 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0787 492 SUPERFAMILY Protein kinase-like (PK-like) 195 487 IPR011009 -
Lal15g0787 492 SMART ANK_2a 55 84 IPR002110 GO:0005515
Lal15g0787 492 CDD STKc_MAP3K-like 195 474 - -
Lal15g0787 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Lal15g0787 492 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 194 356 - -
Lal15g0787 492 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 382 484 - -
Lal15g0787 492 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 8 158 - -
Lal15g0787 492 Gene3D - 2 123 IPR036770 -
Lal15g0787 492 Pfam Protein kinase domain 195 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0787 492 MobiDBLite consensus disorder prediction 1 21 - -
Lal15g0787 492 ProSiteProfiles Ankyrin repeat region circular profile. 55 87 - -
Lal15g0787 492 Pfam Ankyrin repeats (many copies) 41 93 IPR002110 GO:0005515
Lal15g0787 492 PIRSF ILK 181 492 - -
Lal15g0787 492 PIRSF ILK 1 169 - -
Lal15g0787 492 ProSiteProfiles Ankyrin repeat profile. 55 87 IPR002110 GO:0005515
Lal15g0787 492 SUPERFAMILY Ankyrin repeat 26 113 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0787 Lal-Chr15 5673299 5678812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0787 8 492 MAP Kinase Kinase Kinase AT1G14000 71.959 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lal15g0787 Pkinase 9.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0787 - - adu:107481197 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0822 16 5308678 5313456 Lal15g0787 15 5673299 5678812 LSH
Lal15g0787 15 5673299 5678812 Lal23g0810 23 10608833 10613092 LSH