Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0786 ATGTCAAACCCACCATCTATTGGAAATTTTGGGGATAGAAAATTGAAAAGAAAGATGGAGGAATCATCCACCATGAAGAAAGATTTAGATTTATCACTCTCTCTTAGTCTTGGCAGCAACTATGCCATACATGAATCATCATCCAAGCCTTCATTCAAATCCTTGAAGGCCAATGTGGATTTAGGTTTTGATCCAAAGGAGCCTCAATTTTGTTGCAAGTTTTGTGACAAGAAGTTTTTCAATCCTCAAGCTTTGGGAGGACACCAAAACATTCATAGGCGTGAAAGAATCCTCTCAAAGATGGATAAAGAATTTCCTATGAGCACTTTTGGACTCAATGCTTACTCGTGTCCATGCTCATCCATCACAAATCATCATTTTCATGGTTCACCCCATTATCACCCTATGACTCATATGAATCACATGCCTCGAAGTAGTTATGAATTTGACAAGGCCAATAAAGGGTTGCACAACACACCTTTTTCAAAAGTTTTTATTTATTTTTATTGA 510 0.3725 MSNPPSIGNFGDRKLKRKMEESSTMKKDLDLSLSLSLGSNYAIHESSSKPSFKSLKANVDLGFDPKEPQFCCKFCDKKFFNPQALGGHQNIHRRERILSKMDKEFPMSTFGLNAYSCPCSSITNHHFHGSPHYHPMTHMNHMPRSSYEFDKANKGLHNTPFSKVFIYFY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0786 169 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 6 161 - -
Lal15g0786 169 MobiDBLite consensus disorder prediction 1 27 - -
Lal15g0786 169 ProSitePatterns Zinc finger C2H2 type domain signature. 71 92 IPR013087 -
Lal15g0786 169 MobiDBLite consensus disorder prediction 11 27 - -
Lal15g0786 169 PANTHER ZINC FINGER PROTEIN JAGGED 6 161 IPR045320 GO:0003700
Lal15g0786 169 Gene3D Classic Zinc Finger 44 109 - -
Lal15g0786 169 SUPERFAMILY beta-beta-alpha zinc fingers 67 97 IPR036236 -
Lal15g0786 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 97 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0786 Lal-Chr15 5665079 5665588 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0786 64 108 C2H2 Transcription Factor Family AT1G80730 48.889 7.13e-10 54.3