Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0773 ATGGCTCGTTTGGTATTATTCGTACTTTTCTCATCTCTCAGCATTGGCCATTCAAGTGCCATTTATTGTATAAGCAAAGATGGTGTGGATAATGATGAGCTTCAGAAAGCATTAGACTATGCATGTGGGTTTGGAGCTGATTGTGGCCCAATTCAACCAAATGGGCCTTGTTTCGAACCCAATACTGTGAAAGATCATTGCAACTATGCCTTCAATAGCTATTACCTAAATATGCAAAGTGTTGGAGGGACATGTCACTTTGCTGGTGCTGCCACAACCACTCCAACCCCACCTACTAATATTCCTTCAGGATGTGTTTACCCCACAAGTTCTAGTGATTCAGGAGTAGGAACTACACCACCATCATTCGATATACCAACACCTCCATCAACCGATACAAATCCTGGAACAATTTTTGGAACAAATGCTTCTAAACTTCGAAATGGTAGTTCCAGCATTAAAGGCACTAAAGCAATGCTATTAATGCTCATTGTTGTTGTTATGTCATGGTTAACATTAGGGCCTAAATAG 531 0.4068 MARLVLFVLFSSLSIGHSSAIYCISKDGVDNDELQKALDYACGFGADCGPIQPNGPCFEPNTVKDHCNYAFNSYYLNMQSVGGTCHFAGAATTTPTPPTNIPSGCVYPTSSSDSGVGTTPPSFDIPTPPSTDTNPGTIFGTNASKLRNGSSSIKGTKAMLLMLIVVVMSWLTLGPK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0773 176 Gene3D - 17 114 - -
Lal15g0773 176 SMART X8_cls 21 107 IPR012946 -
Lal15g0773 176 PANTHER BETA-1,3 GLUCANASE 1 155 IPR044788 -
Lal15g0773 176 Pfam X8 domain 22 92 IPR012946 -
Lal15g0773 176 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 1 155 - -
Lal15g0773 176 MobiDBLite consensus disorder prediction 111 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0773 Lal-Chr15 5530488 5531900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0773 15 109 Glycoside Hydrolase AT4G26830 44.792 8.40e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0773 - - lang:109350426 181.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0773 15 5530488 5531900 Lal15g0773 15 5530488 5531900 ECH
Lal16g0803 16 5197805 5198999 Lal15g0773 15 5530488 5531900 LSH
Lal15g0773 15 5530488 5531900 Lal23g0828 23 10734683 10736211 LSH
Lal15g0773 15 5530488 5531900 Lal6g0797 6 5356527 5358825 PCT
Lal15g0773 15 5530488 5531900 Lal18g0916 18 11970065 11972127 PCT
Lal6g0797 6 5356527 5358825 Lal15g0773 15 5530488 5531900 PCT
Lal18g0916 18 11970065 11972127 Lal15g0773 15 5530488 5531900 PCT