Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0769 ATGGTCCAATCCCAAAGCCCAACACAAAAAGCCCAAAACCCAAATATAAAAAGCCCCATACCCAAGCAAATACTGAAACTGAACTCAAGGGCACACAACATTCTCATTGAATCTTCACTTTTTCACTCCTTCCCCTACCTTCACTACCGCCATACTGTTTCACACGCGCCACTTCCCAATGCCCACACAAGAAACAAGGCCCTCATAACAGAAGCTTCGTGCCTTCTCATTCTGGTGCATTCGCATTCTCACCGTTACTCCTCTTCCAAATTGCTTCACCCTCGTCTCGTCGGAAAGGGAATATGTGTGAATTTTACCAGAACTTTGACTACAACTCCGTTTAGGCATTTAGCGGGGTCAACTTTTACTTCTAGGTTTTCCGAACAATTTGGCTATGCATCAGCAAGGTCCAACCCAGATTGCACCAGCTGCTCATCTATGGCGGTGGCTGGTTTTTCCAGTGGAACTAAAGAATGTGGGATACGGTGCTTCCATGCTAGTCCAGGAGTCCAGGCAAGAAGTGATCAAACTTTCGGTTTAAAGACACCAAAGAGGGAGAAGTATGTGAGGAAGGACAATAGAAAACAGCCACCCGTTGAAGCTCGATATGTCCCTCCTACTGTCAAAGCTGCAAAATCTGGCCCAGTTAAAACGATAGAAATATTTGAAGGCATGACTATTTCTGAATTTGCAAAGCGTTCTGGAAAATCAGTTACTTTTTTGCAGGGCATCCTGACAAATGTTGGTGAAAAGGTTGAATCAGAGTTTGAGCCTCTCAGCATGGATATTGCAGAGCTTGTTGCAATGGAAGTTGGTGTCAATGTTAAGAGACTACATACAGCAGAAGGTTCAGAAATTTTACCACGTCCTGCAGTTGTAACAGTGATGGGTCACGTCGATCATGGTAAAACTTCTCTTCTCGATGCCTTGCGTTCAACATCAGTGGCAGCTAAGGAGGCAGGCGGCATAACTCAGCATGTAGGTGCCTTTGTGGCGATTATGCCATCAGGAGCATCAATCACATTTCTTGACACTCCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCAGCAGTCACAGATATAGTAGTGCTGGTTGTTGCTGCAGATGATGGAGTGATGCCTCAAACACTTGAAGCTATGTCCCATGCAAAAGCAGCTAATGTACCAATTGTAGTTGCTATTAATAAATGTGATAAACCAGATGCAAATCCTGAAAGAGTAAAACTGCAGCTTGCTTCAGAGGGCTTACTGCTGGAGGAGATGGGTGGGGATGTTCAGGTCGTTGAAGTTTCGGCCGCTAAAAAAACTGGACTGGATAACCTGGAGGAAGCTCTACTCCTCCAGGGTGAAATAATGGATCTGAAAGCACGCATTGATGGGCCTGCTCAAGCTTATGTGGTGGAAGCAAGAGTAGATAAAGGACGGGGTCCATTGATAACCACTATAGTGAAGGCAGGGACTCTTGCTTGTGGTCAGCATGTGGTTGTAGGCTCGGAGTGGGGAAGAATAAGGGCTATTAAAGATATGGTGGGGAGAATAACTCAGCGAGCAACTCCTGCAATGCCTGTTGAAATCGAAGGGCTTAGAGGGCTGCCGATGGCTGGTGATGATGTTATTGTTGTTCATTCTGAGGAGCGAGCTAGAATGCTTAGTTCTGGTAGAAAACGGAAATATGAAGAGGACAGGCTTAGGAAGATGATGATCCAGGACAGGCCATCTACATCGGAATCATCTGAGGGCGAGGAGGTTCCACGAAGGGTTGAAATGCCAGTTATAGTAAAAGCAGATGTTCAGGGAACTGTTCAAGCCATCACAGATGCATTGAGAACTTTAAATAGTGCTCAGGTTTTTGTCAATGTTGTCCATGTTGGTGTTGGGCCTATTTCTCAATCTGATGTGGACCTAGCACAAGCTTGTGGTGCATGCATAGTTGGATTTAATGTCAAGAATCCACCAACTTCTCTTAGTCAAGCAGCAAGTCGTGCCAGTATCAAGTTAATTTTGCATCGTGTGATATACCACCTATTGGAGGACATTGGCAATTTGATAATAGAAAAGGCCCCTGGCACTTCTGAGACCCATATAGCTGGGGAAGCAGAGGTGCTGAATATCTTTGAAGTCAAAGGAAGCAAAACCAAGGGACCTGATGTGAAGATAGCTGGTTGCAAAGTCGTCGACGGTTTCGTGGCCAGGTCATCAACTATGAGGCTTATGAGGAGTGGGGAACTTGTGTATGAAGGACCTTGCACATCTCTTAAGAGGGAGAAACAGGATGTGGACACTGTGAAGAAGGGAAATGAGTGTGGACTAGTAATCAGTGATTGGCAAGATTTTCAGATTGGCGACGTTATTCAGTGCTTAGAACAAGTTGTGAGGAAGCCTAAGTTTATTAAGTCTGAGAGTGGTGCTGTTCGAATTGAGTGCTGA 2436 0.4536 MVQSQSPTQKAQNPNIKSPIPKQILKLNSRAHNILIESSLFHSFPYLHYRHTVSHAPLPNAHTRNKALITEASCLLILVHSHSHRYSSSKLLHPRLVGKGICVNFTRTLTTTPFRHLAGSTFTSRFSEQFGYASARSNPDCTSCSSMAVAGFSSGTKECGIRCFHASPGVQARSDQTFGLKTPKREKYVRKDNRKQPPVEARYVPPTVKAAKSGPVKTIEIFEGMTISEFAKRSGKSVTFLQGILTNVGEKVESEFEPLSMDIAELVAMEVGVNVKRLHTAEGSEILPRPAVVTVMGHVDHGKTSLLDALRSTSVAAKEAGGITQHVGAFVAIMPSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVVAINKCDKPDANPERVKLQLASEGLLLEEMGGDVQVVEVSAAKKTGLDNLEEALLLQGEIMDLKARIDGPAQAYVVEARVDKGRGPLITTIVKAGTLACGQHVVVGSEWGRIRAIKDMVGRITQRATPAMPVEIEGLRGLPMAGDDVIVVHSEERARMLSSGRKRKYEEDRLRKMMIQDRPSTSESSEGEEVPRRVEMPVIVKADVQGTVQAITDALRTLNSAQVFVNVVHVGVGPISQSDVDLAQACGACIVGFNVKNPPTSLSQAASRASIKLILHRVIYHLLEDIGNLIIEKAPGTSETHIAGEAEVLNIFEVKGSKTKGPDVKIAGCKVVDGFVARSSTMRLMRSGELVYEGPCTSLKREKQDVDTVKKGNECGLVISDWQDFQIGDVIQCLEQVVRKPKFIKSESGAVRIEC 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0769 811 SUPERFAMILY Translation proteins 696 796 IPR009000 -
Lal15g0769 811 TIGRFAM IF-2: translation initiation factor IF-2 217 794 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lal15g0769 811 CDD IF2_mtIF2_II 464 559 IPR044145 -
Lal15g0769 811 Gene3D Translation factors 461 575 - -
Lal15g0769 811 CDD mtIF2_IVc 700 789 - -
Lal15g0769 811 MobiDBLite consensus disorder prediction 1 20 - -
Lal15g0769 811 Pfam Elongation factor Tu GTP binding domain 293 449 IPR000795 GO:0003924|GO:0005525
Lal15g0769 811 Gene3D - 286 460 IPR027417 -
Lal15g0769 811 CDD IF2_eIF5B 292 455 - -
Lal15g0769 811 Hamap Translation initiation factor IF-2 [infB]. 10 797 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Lal15g0769 811 Pfam Translation-initiation factor 2 588 682 IPR023115 -
Lal15g0769 811 MobiDBLite consensus disorder prediction 1 19 - -
Lal15g0769 811 Gene3D Translation factors 695 796 - -
Lal15g0769 811 SUPERFAMILY Translation proteins 462 544 IPR009000 -
Lal15g0769 811 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 288 458 IPR000795 GO:0003924|GO:0005525
Lal15g0769 811 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 138 802 IPR015760 -
Lal15g0769 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 479 IPR027417 -
Lal15g0769 811 PANTHER TRANSLATION INITIATION FACTOR IF-2, MITOCHONDRIAL 138 802 - -
Lal15g0769 811 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 588 699 IPR036925 -
Lal15g0769 811 Gene3D - 588 692 IPR036925 -
Lal15g0769 811 TIGRFAM small_GTP: small GTP-binding protein domain 291 444 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0769 Lal-Chr15 5496034 5502250 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0769 289 680 Eukaryotic Initiation Factors Gene Family AT1G21160 26.681 2.56e-26 114