Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0766 ATGTCAGACAAACAATTTGTTGGAGATTTTTGGGATAGAAAACTGAAGCGAAAAATAGACGAATCATCTATCATGGACAAAGATTCAGAATTGTCACTCTCTTTGAGTTTAGGCAGCAACATGGTACAAGAATCATCATCAAAGAAGAAGGCCCATGAGGTTCCAAAACTTGTCGAAAACTCCAATGACAACCAAGTGATCATACCTAAGGAGCAACAATTCTCATGCAAGTTTTGCGACAAGAAATTTTCCAACTCTCAAGCTTTGGGCGGACACCAAAACGCTCATAGGCGTGAAAGAATCCTGTCAAGGATGAACAAAGAATTTGCCATGGGTACTTTTGGACACGGTGCTCACATGTGTCCTTATTCACCCATGACAAATCGTCATCCTTTTCGTGATTCACACCTTTATCATGAGGCTCACATGCACCCTATGGCTCACATGTCCCCACCCATGCCCTGGCGTCGTTTCGAACTTGGTTATGGTAACCAAGGGTTTTACAACACACCCTTCCATGGTCATCAATTTCCATTGGGTACAAGTACTGAAACTCAACAAAGATTGAATCATAGAAATGTTGGCATCGGTTGTGAACTTAATCAAGTTCCTTCACATGCAGAGGGTATAGTTAATAGATCCACTACTACTGCTCTTAATGATCTTGAAGGCCTTCCAGGAACTCATCATGCTAGGAACCAACAAATTTCTTCTCCAAGGCCTAACTTGTCCCTCAATCTTTAA 744 0.4167 MSDKQFVGDFWDRKLKRKIDESSIMDKDSELSLSLSLGSNMVQESSSKKKAHEVPKLVENSNDNQVIIPKEQQFSCKFCDKKFSNSQALGGHQNAHRRERILSRMNKEFAMGTFGHGAHMCPYSPMTNRHPFRDSHLYHEAHMHPMAHMSPPMPWRRFELGYGNQGFYNTPFHGHQFPLGTSTETQQRLNHRNVGIGCELNQVPSHAEGIVNRSTTTALNDLEGLPGTHHARNQQISSPRPNLSLNL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0766 247 PANTHER C2H2-TYPE ZINC FINGER PROTEIN 1 214 - -
Lal15g0766 247 MobiDBLite consensus disorder prediction 225 247 - -
Lal15g0766 247 SUPERFAMILY beta-beta-alpha zinc fingers 70 101 IPR036236 -
Lal15g0766 247 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Lal15g0766 247 Gene3D Classic Zinc Finger 46 112 - -
Lal15g0766 247 PANTHER ZINC FINGER PROTEIN JAGGED 1 214 IPR045320 GO:0003700
Lal15g0766 247 MobiDBLite consensus disorder prediction 230 247 - -
Lal15g0766 247 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0766 Lal-Chr15 5473593 5474336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0766 70 175 C2H2 Transcription Factor Family AT5G01860 34.579 8.43e-12 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal15g0766 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0766 - - lang:109350422 233.032