Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0763 ATGGACGAGGACCAAGAGATGGAGAGGTTTGGAATGGACAATGATTTTGAAGGTGGTGAATGGATTGATGGTGAGTATTACTATCAAAAGCGTAAAGAAAAGCGTACTCAAACCAGAGAAGATGTTCTTTATGGGGTTTTTGCAGACTCAGATGATGACGACGATGAATATTCTAGCAAAAAGCGCAGAAAAGATCGGGGCTTATCTAAGAAGCAAGACCTCACCAAGCCTGTGAATTTTGTCTCTACTGGCAATTTCATGCCTAATCAAGATACTGATAAGAATTCTAAAGAACAGGTTGAACAGGATAACTGTGTTAGTGAAGATAGGCCGGGTGTAGGTCTCAGCATGGGGTCTGGTAGCACTTCCGGATCTGGCTTAGGTTTTAATTCCAGTTATACTACAAATGGTTCTGATAGAAACAATGATTTTAATGAGAATGACGATGATAACTTTCTGTCTACGGTACCTACTGCATTCGGAAAGAAGATTAAGCAGGGGGCAATGAGAAGGGAAAGGGAAAGGGAAAGGGAGAGAGAAAAATCGGATAAGAGGAGGGGTCAACATCAAAGTGTAGGTAAAGATGTTGATGTTGGGAAATTTGAGAAGCATACGAAGGGAATAGGGTTGAAGCTATTGGAGAAGATGGGTTATAAAGGTGGTGGTCTTGGGAAGAACGAGCAAGGTATTGTGGCTCCTATTGAGGCGAGATTGAGGGCCAAGAATACTGGTATTGGATTTAATGACTCTAAGGAGATTATGCCGTTGCAGCCTGCTTTGAAGGTAGAGAACAATAGTTCACCTGGAATCAACCAATCTACTGCTGGGCGAACAAAAGAAAGACCATGGTCAAAGCAAGCAAGGTTGAAGAAGAAGAAAGCAAGCAAGGCTGAAGAAGAGGAAGACTATATTACTGCACAGGAATTATTGGAAAGCAAGCAAGAACAAGGTTCAGAGGTTGTTCAGAAGGTTTATGATATGAGGGGGCCACAGGTTCGATTAATTACAAATTTGTCCGATTTAAATGCTGAGGAGAAAGCAAGGGAAAATGATGTTCCAATGGCAGAACTTCAGCATAATATAGGGTTAATAGTTAGGTTGGCCGAAGTTGATATCCAAGAGATTGATAGAAATTTGAGGAGGGAGAGAGAGACAGCACTTAGCTTGAAGAAAGACAAAGAGAAGTTAGAAATTGAGACTGCATTTAAAAGGAAGCAGGTGGATATTATGGAGGAAATAGCGGGTGTGTTGGACCAAATGGACAAAGAGAACAATCTAGGAACATTAACATTGGATTCCCTTGCTCAAAGCTTTAGTGACTTGCATAAAAGATATGCTGATAACTATAAGTTGTGTAACTTGTCATGTATTGCTTGCTCATATGCTTTGCCTCTGTTTAACAGCATTTTTCAAGGATGGGATCCTCTTCGAAATCCATATCATGGGATAGAATTGGTATCATTTTGGAAGACATTGCTACAAGAAGAAGATTGCCTTGATATATGGGATGTGTCATCGCCTTACACCCAATTGGTTTCTGAGGTTGTATTGCCAGCTGTTAGAATATATGGTATCAATACCTGGCAAGCACGGGATCCTGAGCCGATGTTACGGTTTCTTGAGTCATGGGAAAAGTTGCTTCCTTCTTCTGTCCTCGCTACAATATTGGACAATATAGTCATGCCAAAATTGTCAAGTGCTGTAGAAGCTTGGGAACCTCATCATGAAACCATTCCCATTCATAATTGGGTGCATCCATGGCTTCCTCTGCTAGGACACAAATTGGAGGGTGTATACCAGGGGATTCGTTTTAAATTGAGTACTGTTCTCGGAGCCTGGCACCCAAGTGATGGTTCTGCCTATGCAATATTGTCTCCTTGGAAGACTGTATTTGATCCTGCAAGTTGGGAACAGCTCATGCTTCGTTTCATTGTGCCAAAGTTGCAGATTGTCTTGCAAGAGTTCCAAGTGAACCCGGCAAGTCAGAATCTTGATCAATTTTATTCAGTAATGAACTGGGCTTCTGCTATTCCAATTCATCTGATGGTTGATATGATGGAGAAAATTCTCTTCGCCAAGTGGCTTCAGGTTCTGTATCATTGGTTGTGCTCAAGTCCTAATTTTGAGGAAGTTACAAAATGGTATTTGGGTTGGAAAGAACTTATTCCAAAAGAACTTTTGGCAAATGAAAGCATCCGATATCAGCTTAACCGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGCAGGTGGTTCAACCTGGTTTAAAAGAGAATATCAGCTATCTTAGGGTACTCGAGCAAAGGCAATTTGAAGCACAGCAGAAAGCAGCAGCTTATGCTCAACACCAAGCTGCTGCATGCTTAGGCAGTGCTGTCAACATTGATGGTGTGGCCAGCATGCAATCACATGAGTTGACCTTGAAAGAAGTTATCGAGGCTCATGCCCAGCAACATGGTTTGCTATTCAAGCTTAAACCTGGAAGAATACACAATGGTCATCAAATATATGGGTTTGGTAATATCAGCATAGTAATTGACTCACTAAATCAAAAGGTATATGCCCAAAATGAGGACACATGGTCTTTGGAATCTCTCCAAGGCTTGCTAGAGTTGAACAACAAGTCTCATAGCAAAAGACGCTGA 2649 0.4149 MDEDQEMERFGMDNDFEGGEWIDGEYYYQKRKEKRTQTREDVLYGVFADSDDDDDEYSSKKRRKDRGLSKKQDLTKPVNFVSTGNFMPNQDTDKNSKEQVEQDNCVSEDRPGVGLSMGSGSTSGSGLGFNSSYTTNGSDRNNDFNENDDDNFLSTVPTAFGKKIKQGAMRREREREREREKSDKRRGQHQSVGKDVDVGKFEKHTKGIGLKLLEKMGYKGGGLGKNEQGIVAPIEARLRAKNTGIGFNDSKEIMPLQPALKVENNSSPGINQSTAGRTKERPWSKQARLKKKKASKAEEEEDYITAQELLESKQEQGSEVVQKVYDMRGPQVRLITNLSDLNAEEKARENDVPMAELQHNIGLIVRLAEVDIQEIDRNLRRERETALSLKKDKEKLEIETAFKRKQVDIMEEIAGVLDQMDKENNLGTLTLDSLAQSFSDLHKRYADNYKLCNLSCIACSYALPLFNSIFQGWDPLRNPYHGIELVSFWKTLLQEEDCLDIWDVSSPYTQLVSEVVLPAVRIYGINTWQARDPEPMLRFLESWEKLLPSSVLATILDNIVMPKLSSAVEAWEPHHETIPIHNWVHPWLPLLGHKLEGVYQGIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDPASWEQLMLRFIVPKLQIVLQEFQVNPASQNLDQFYSVMNWASAIPIHLMVDMMEKILFAKWLQVLYHWLCSSPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMQVVQPGLKENISYLRVLEQRQFEAQQKAAAYAQHQAAACLGSAVNIDGVASMQSHELTLKEVIEAHAQQHGLLFKLKPGRIHNGHQIYGFGNISIVIDSLNQKVYAQNEDTWSLESLQGLLELNNKSHSKRR 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0763 882 Pfam GC-rich sequence DNA-binding factor-like protein 431 698 IPR022783 -
Lal15g0763 882 MobiDBLite consensus disorder prediction 75 93 - -
Lal15g0763 882 SMART G-patch_5 203 248 IPR000467 GO:0003676
Lal15g0763 882 Coils Coil 365 399 - -
Lal15g0763 882 MobiDBLite consensus disorder prediction 165 199 - -
Lal15g0763 882 Pfam G-patch domain 205 246 IPR000467 GO:0003676
Lal15g0763 882 MobiDBLite consensus disorder prediction 32 199 - -
Lal15g0763 882 MobiDBLite consensus disorder prediction 54 72 - -
Lal15g0763 882 PANTHER TUFTELIN-INTERACTING PROTEIN 11 7 868 - -
Lal15g0763 882 MobiDBLite consensus disorder prediction 262 280 - -
Lal15g0763 882 Pfam Tuftelin interacting protein N terminal 4 102 IPR022159 -
Lal15g0763 882 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 7 868 IPR045211 GO:0000390
Lal15g0763 882 MobiDBLite consensus disorder prediction 262 294 - -
Lal15g0763 882 MobiDBLite consensus disorder prediction 116 141 - -
Lal15g0763 882 PIRSF TFIP11 1 877 IPR024933 -
Lal15g0763 882 Coils Coil 296 316 - -
Lal15g0763 882 ProSiteProfiles G-patch domain profile. 205 250 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0763 Lal-Chr15 5449449 5452097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0763 208 246 C2H2 Transcription Factor Family AT5G26610 53.846 1.74e-07 52.0