Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0715 ATGGCGCAACCACCAGCACTCGAACAAGTCCAATGCTTCGGCCGCAAGAAAACCGCCGTCGCCGTCACCTACTGCAAGCGCGGTCGCGGCCTGATCAAGATCAACGGCAGCCCAATCGAACTAGTTGAACCGGAAATCCTCCGGTTCAAGGCTTTCGAACCAATCCTCTTATTGGGGAAATCCCGGTTCGCAGGTGTGGACATGAGGATTCGCGTGAAGGGTGGGGGCCACACTTCACAGATCTATGCCATAAGACAGAGCATAGCGAAAGCACTCGTCGCGTTTTACCAGAAGTACGTTGATGAACAGAGCAAGAAGGAGATTAAGGATATTCTTGTTAGGTATGATCGTACTTTGCTTGTTGCTGATCCAAGGCGTTGTGAGCCTAAGAAGTTTGGTGGTCGTGGTGCTCGTGCTAGGTTCCAGAAATCTTACCGTTAA 441 0.5125 MAQPPALEQVQCFGRKKTAVAVTYCKRGRGLIKINGSPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0715 146 Pfam Ribosomal protein S9/S16 14 146 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lal15g0715 146 Gene3D - 3 146 IPR014721 -
Lal15g0715 146 PANTHER RIBOSOMAL PROTEIN S9 4 146 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lal15g0715 146 SUPERFAMILY Ribosomal protein S5 domain 2-like 9 146 IPR020568 -
Lal15g0715 146 ProSitePatterns Ribosomal protein S9 signature. 74 92 IPR020574 GO:0003735|GO:0005840|GO:0006412
Lal15g0715 146 PANTHER - 4 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0715 Lal-Chr15 4975982 4976422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0715 1 146 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 87.671 1.26e-93 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0715 K02960 - gmx:100812117 278.87