Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0710 ATGCTTCCTTCCTTGTTTGGATTGTTCACTTTTCTAGGAATACATCTCCCTGTAGTAATGTCTGATTGTCCCTTGGATTTTACTTTTTCAAACTTTACATTGGCATCCTCTATATGTTCTAATCAGGGCGACAGGGGAAAATGCTGTCGCTACATTAATGCTAACATTGCAATTTCTGTTGCCCGTTTTGTTAATACAACAAGCGGCCTAGGGGTTCCTCCAGATGCGTCTGAAATCTGCCTCCAGACCATATCTCAGACTTTGCACCTTTATGGTGTTGTACAAAATGCAACAGTTTTCTGTGGTCTTGGGACAAAAATTCCTGTTAATTACGAATGCAAGGCTCGTACTACTGTCATGCAAATGTTGCAATCTCCTAGATTTGTAGAGGTCACAAAAAATTGCAAACTGCCGCTGGGAGAGGAAATTAAATGCAAGAAGTGCTTAAATTCCGGCATTGGTTTTCTACATCATCTTGGAATCGAAGATAATATAACACTGAGTACATGCCGTGACGCCTCTTTTGTTGCACTAGCAAGTCAAGTTGATCAAAGATCTAGCATTGACATTGCAAGTTGTTTCTTTGGAGTTCAAGGACTTCTTGGGGCACCTGAGTCATCCCCGTCCTTGCCTGCTCCCGAGGCTTCTCCAAGCTCGGTTGCTGATAGCCCAAGTCAATTATTGGTAGGCCTACCTTTAAAGGAAAAACATCATTCATATCACTTGACAATAGTTCCAGGTATTGCTATCGCCGTCACAGCTGTTGCTGTTTTGATGCTTCTAGTCTTGATAATTCTAATTCGCCAGAAAAGCAGAGAGCTAGACGAGCCTGATAATTTTCGTAAAACCTCTTCAAAAGCCTTACCTCCTAGTGCAACTTGGAAATTTCAGGAAGGTTCTTCGTCCATGTTCCGAAAATTTAGCTATAAGGAGATAAAGAAAGCAACAGAGGATTTTAGTACTATCGTTGGGCAAGGGGGATTTGGAACAGTGTATAAAGCTCATTTCAGTGATGGTCTGGTAGCAGCAGTAAAGCGGATGGACCGAGTGTCAGAGCAAGCAGAGGATGACTTCTGCAGAGAAATCGAGCTTCTTGCCCGGCTTCACCATCGGCATCTTGTTTCTCTAAGAGGCTTTTGCATTAAAAAACATGAGAGGTTTCTGATATATGAGTACATGGGAAATGGAAGCTTGAAAGATCATCTTCATTCCCCTGGTAAAACACCTCTAACTTGGCGAACAAGAATACAAATTGCTATCGACGTGGCTAATGCACTGGAGTACCTTCATTTCTATTGTGATCCTCCTCTGTGCCACAGGGACATCAAGTCTAGCAACACTTTACTAGATGAGAACTTCGTTGCTAAGATTGCAGATTTTGGCCTTGCTCAAGCTTCAAAAAATGGTTCAATATGCTTTGAACCTGCAAACACCGAAATCTGGGGAACACCAGGATATATAGATCCTGAATATGTTGTTATTCAAGAGCTCACTGAGAAAAGCGATATATACAGTTTCGGGGTGCTGCTACTGGAGATTATAACAGGAAGACGAGCTATTCAAGATAATAAGAATTTGGTGGAATGGGCACAACCATACATGGAATCAGAAACAAGATTATTGGAGCTAGTAGATCCCAATGTGAGGGAATCTTTTGACTTGGATCAGCTCCAAACAGTAGTATCTATAGTAGGATGGTGCACTCAGAGAGAAGGAAGGGCAAGGCCTTCAATAAAACAGGTCCTAAGGCTTCTGTATGAGACATCAGAACCAATGCATAGTGAGTTTGTACAAGTCGATGAAGATGCAGAATGCCAGGGAAATCAGCAAAGAAGCCGAAGAAGCAAGGGGAAAATGCTCAGAAACGAAGCGGTTTTTCACAGCGGGGATGGACGATATCTTGCTTCATCTTCAAGTACATCGCAGTCATATTGCAGCAGAAGCTTTTTGCTCGAGACTGGCTCTCCGCAATCCCCACCAAATATATTCTCTCTCTGA 1998 0.4244 MLPSLFGLFTFLGIHLPVVMSDCPLDFTFSNFTLASSICSNQGDRGKCCRYINANIAISVARFVNTTSGLGVPPDASEICLQTISQTLHLYGVVQNATVFCGLGTKIPVNYECKARTTVMQMLQSPRFVEVTKNCKLPLGEEIKCKKCLNSGIGFLHHLGIEDNITLSTCRDASFVALASQVDQRSSIDIASCFFGVQGLLGAPESSPSLPAPEASPSSVADSPSQLLVGLPLKEKHHSYHLTIVPGIAIAVTAVAVLMLLVLIILIRQKSRELDEPDNFRKTSSKALPPSATWKFQEGSSSMFRKFSYKEIKKATEDFSTIVGQGGFGTVYKAHFSDGLVAAVKRMDRVSEQAEDDFCREIELLARLHHRHLVSLRGFCIKKHERFLIYEYMGNGSLKDHLHSPGKTPLTWRTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNTLLDENFVAKIADFGLAQASKNGSICFEPANTEIWGTPGYIDPEYVVIQELTEKSDIYSFGVLLLEIITGRRAIQDNKNLVEWAQPYMESETRLLELVDPNVRESFDLDQLQTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSEFVQVDEDAECQGNQQRSRRSKGKMLRNEAVFHSGDGRYLASSSSTSQSYCSRSFLLETGSPQSPPNIFSL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0710 665 SMART serkin_6 317 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0710 665 CDD STKc_IRAK 323 585 - -
Lal15g0710 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Lal15g0710 665 SUPERFAMILY Protein kinase-like (PK-like) 297 588 IPR011009 -
Lal15g0710 665 Pfam SPARK 21 157 IPR043891 -
Lal15g0710 665 Gene3D Transferase(Phosphotransferase) domain 1 393 613 - -
Lal15g0710 665 Pfam Protein kinase domain 321 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0710 665 ProSiteProfiles Protein kinase domain profile. 317 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0710 665 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Lal15g0710 665 Gene3D Phosphorylase Kinase; domain 1 284 392 - -
Lal15g0710 665 PANTHER BNAC06G02630D PROTEIN 10 665 - -
Lal15g0710 665 PANTHER OS01G0750732 PROTEIN 10 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0710 Lal-Chr15 4952066 4960951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0710 23 665 Receptor kinase-like Gene Family AT3G19300 62.287 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Lal15g0710 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0710 - - ahf:112715638 1080.86