Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0706 ATGGGTCTCGTTTCAAATCAACGAGGCTCTAGAACAGAGACGACCCAAGAAGGTTTACTGGTTACCGTTTCATCTGGTGGTGGTGCTGTCCCGAAGAAGAAATGGTCCAATTTAATGCCTCTCTTTTTGATCCTTGTGGTCATTGCAGAGATTGCGTTTCTGGGTAAACTTGATATGGTAAAAAACGCATCCATGGTTGATACCTTTGCTGACCTGTTCTACCGGTCACGGGTCGCGGTTGAAGGCGGTGATGATGGTGATGGTTCGGGGATAGCTGTGATAAGCAGTGTTCATAATTCTATAACAGAGAGTTGTGAGGAATGGTTGGAGAGAGAAGATGGTGTTACATATTTAAGGGATTTTACGAAGGAACCTGTTATTGTTTCTGGAGCTGGCCAGGACTGGAAGTCGTGTTCAGTGGGATGTAAATTTGGGTTTAATCAGGATAAGAAACTTGATGCTGCGTTTGGAGAACCACAAGCTGGAATAGCAAGTATTCATAGATCAATGGAATCAGCTGAATACTATCATGTGAACAATATTAACATGGCACGACGGTGGGTAAGCACTATTATAAAGCAGGGGTATAATATTGTAATGACAACCAGTCTATCATCTGATGTACCTGTTGGATATTTTTCGTGGGCTGAGTATGACATCATGGCACCGGTAGAGCCAAAAACTGAAGCTGCTCTTGCAGCTGCATTCATTTCGAATTGTGGAGCTAACAATTTCCGATTGCAAGCTCTTGAAGCCCTTGAAAAAGCAAACATCAAGATTGATTCTTATGGTGCTTGTCATAGGAACCGTGATGGAAGAGTGAACAAAGTGGAAACCCTGAAGCGCTACAAGTTTAGCTTAGCATTCGAAAATTCTAATGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCCCTAGTGGCTGGAACTGTCCCTGTGTTTGTTGGTGCTCCAAATATTGAGGATTTTGCTCCTTATCCTGGTTCAGTTTTACATATTAAAAAGCTAGAAGATGCTGAATCCATTGCCAAGACCATGAAACATCTAGCAGAAAATCCTGAAGCATATAATCAATCATTGAGGTGGAAGTATGAAGGCCCGTCTGATTCCTTCAAGGCCCTTGTGGATATGGCCGCTGTGCATTCATCTTGCCGCCTTTGCATTCACGTGGCCACAACGATTAGAGAGAATGAAGAAAAGAGCCCAGCCTTCAAGAAACGCCCTTGCAAGTGCACCAGAGGGTCAGAAACTGTACATCATATCTATGTGAGAGAAAGGGGAAGATTTGAGACAGAGTCTATTTACTTGAGGTCTAGCAATTTAACACTCGAGGCCTTGAAATCTGTGGTCGCATTGAAGTTCAAATCCCTGAATCATGTACCTATATGGAAGCCAGAAAGACCTGAAATTCTAAGAGGAGGCAATGAATTGAAAATTTACAGAATATACCCTGTTGGGTTGACACAGAGGCAAGCTCTTTATTCCTTCAGCTTCAAAGGGGATAAGGATTTCAGGAATCACTTAGATAGTAATCCTTGTGCAAAGTTTGAAGTCATTTTTGTGTAG 1566 0.4227 MGLVSNQRGSRTETTQEGLLVTVSSGGGAVPKKKWSNLMPLFLILVVIAEIAFLGKLDMVKNASMVDTFADLFYRSRVAVEGGDDGDGSGIAVISSVHNSITESCEEWLEREDGVTYLRDFTKEPVIVSGAGQDWKSCSVGCKFGFNQDKKLDAAFGEPQAGIASIHRSMESAEYYHVNNINMARRWVSTIIKQGYNIVMTTSLSSDVPVGYFSWAEYDIMAPVEPKTEAALAAAFISNCGANNFRLQALEALEKANIKIDSYGACHRNRDGRVNKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVFVGAPNIEDFAPYPGSVLHIKKLEDAESIAKTMKHLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHVATTIRENEEKSPAFKKRPCKCTRGSETVHHIYVRERGRFETESIYLRSSNLTLEALKSVVALKFKSLNHVPIWKPERPEILRGGNELKIYRIYPVGLTQRQALYSFSFKGDKDFRNHLDSNPCAKFEVIFV 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0706 521 PANTHER FUCOSYLTRANSFERASE-LIKE PROTEIN-RELATED 34 498 - -
Lal15g0706 521 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 34 498 IPR001503 GO:0006486|GO:0008417|GO:0016020
Lal15g0706 521 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 130 397 - -
Lal15g0706 521 Gene3D - 167 370 IPR038577 -
Lal15g0706 521 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 231 395 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0706 Lal-Chr15 4915853 4922764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0706 1 521 Xyloglucan Fucosyltransferase1 AT3G19280 64.205 0.0 676
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0706 15 4915853 4922764 Lal23g0886 23 11142658 11150035 LSH