Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0704 ATGTCTCAGTCTCACTCTTCAACCATGATCAACTCCGACCAAGAACTCTCTGTCATCATCGCCGCTCTCACCAACGTTGTCATCGGTTCCACCTCCAATGTTATCCATTTCCACTCACCGGAAACATCACAACCTTCCACCACCACCGGAGGAACCAGCTTTGATCTAGTCCCAACCGTGACAATGGAAATTTGCCAGGAATGCAACATTGTAGGGTGCTTAGGCTGCAACTTATTCCCAAAAGAGAATAAGAAACAGAAGAGTTCCCAGAAGAAATATCGGGGAGTGAGACATAGACCGTGGGGAAAATGGGGTGCCGAGATTCAAGATCCTAAGATTGGTTCGCGAGTGTGGCTTGGAACTTTTAACACGGCCGAGGAGGCTGCCAGAGCTTACGATAAAGCGAACATCGAGTTCCGTGGGTCGCAAGCAAAACTTAATTTCCCATTGCGGGAGAATGAAAGTGTGAATGTGGTTGTTGAAACAGAGGAAGAAGTGATGGGTGAGAATGTAAATGAAGGAATGGAAGTGGAGACATTTGAAAATAATAAGGAAAGTGAATTTTGGGAGAAGATTGGAGAAGCTCAATATCAGAATCTTGTGATGATGGTGAATGATTTAGTTGGAGAATCTTCTGATTCTGCTGCGAGGAACACATTTAGTTCTTGA 669 0.4484 MSQSHSSTMINSDQELSVIIAALTNVVIGSTSNVIHFHSPETSQPSTTTGGTSFDLVPTVTMEICQECNIVGCLGCNLFPKENKKQKSSQKKYRGVRHRPWGKWGAEIQDPKIGSRVWLGTFNTAEEAARAYDKANIEFRGSQAKLNFPLRENESVNVVVETEEEVMGENVNEGMEVETFENNKESEFWEKIGEAQYQNLVMMVNDLVGESSDSAARNTFSS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0704 222 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 215 - -
Lal15g0704 222 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 1 215 - -
Lal15g0704 222 CDD AP2 93 149 IPR001471 GO:0003700|GO:0006355
Lal15g0704 222 SMART rav1_2 92 155 IPR001471 GO:0003700|GO:0006355
Lal15g0704 222 Pfam AP2 domain 92 141 IPR001471 GO:0003700|GO:0006355
Lal15g0704 222 PRINTS Ethylene responsive element binding protein signature 93 104 IPR001471 GO:0003700|GO:0006355
Lal15g0704 222 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Lal15g0704 222 Gene3D AP2/ERF domain 91 151 IPR036955 GO:0003700|GO:0006355
Lal15g0704 222 ProSiteProfiles AP2/ERF domain profile. 92 149 IPR001471 GO:0003700|GO:0006355
Lal15g0704 222 SUPERFAMILY DNA-binding domain 92 150 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0704 Lal-Chr15 4881022 4881690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0704 85 149 AP2-EREBP Transcription Factor Family AT2G33710 72.308 1.18e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal15g0704 AP2 2.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0704 - - lang:109332667 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0704 15 4881022 4881690 Lal23g0888 23 11160812 11161333 LSH