Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0689 ATGGGGGTTTGCAATTCTAAGCCACATAAACCAAACCCATATGCACCTAGTGAATCTGAAGCTGAAAATGACTCTTTTGACCCTTCACAAATCCCCAAAACCCCATCCACTCCCAGCAACCACCGCCGGAAAGATGACGTCATCACCGGAAAGAAGTCAGCTTTCTTCTCCTTCTACAGTCCCAGCCCTGCCCGCTTCTTCAAGCAGTCTCCTTCGCCTTCTGTGGGAGGGAGCAGGAGCGCCAACTCAACGCCGATGAGGTTTTTCCGGCGGCCGTTCCCTCCGCCGTCTCCGGCGAAGCACATAAAAGCCTTGCTGGCTAGGCGGCAGGGGAAGAAGTCCGCTACGGCGGGAGAAGGAGAAGAGAGTGCCGAAGGTGGTGATTTGGATAAGAGGTTTGGGTTTTCAAAGGAATTCAGTAGTAGATTGGAAATTGGTGAAGAAGTTGGAAGAGGGCATTTTGGGTATACTTGTTCTGCTAGGTTCAAGAAGGGTGAACTTAAGGGCCAAAAAGTTGCTGTGAAAGTTATCCCAAAAGCTAAGACAAAGGTTGAGGTTTTAGGTCCTTTATATTTTGAGGATTCTTTCAGTTTCAGTAGATTGTGGATTTGGGAAAGTAGGCCAAGTCGTGTGGGAATGACAACAGCAATCGCAATTGAAGATGTGAGGAGGGAGGTGAAAATATTGCGAGCTTTGAATGGACACAACAATCTGGTACAATTCTATGATGCATTTGAGGACCAAGATAATGTCTACATTGTAATGGAGTTATGTGAAGGGGGAGAGCTTTTAGATATGATACTGTCAAGAGGAGGGAAATACACAGAAGATGATGCAAAAGCTGTCATGGTACAGATACTAAATGTTGTTGCATTTTGTCATCTTCAGGGTGTGGTGCACCGAGATCTGAAGCCAGAGAATTTTTTGTATGCTTCAAAGGATGAAAATTCTGAGTTAAAAGCTATAGACTTTGGATTGTCAGACTTTGTCAGACCAGATGAACGGCTTAATGACATTGTTGGAAGTGCATACTATGTGGCCCCTGAAGTTCTCCATAGATCTTACACCACAGAGGCTGATGTGTGGAGTATAGGCGTGATTGCATATATTCTTTTATGCGGTAGTCGACCATTTTGGGCACGAACGGAATCTGGTATTTTTCGGGCAGTTTTAAAAGCTGATCCAAGCTTTGATGAACTTCCCTGGCCTTCTTTATCTACACAAGCAAAAGATTTTGTCAAGCACCTATTGTATAAGGACCCGCGGAGGCGAATATCTGCTGCTCAGGCTCTATGTCACCCTTGGATACGAAATTACAATAGCGCTTATATGCGATCATCGTCCTTGCGTAAGGCTGCCTTAAGGGCCTTGTCAAAGACATTGACTGCTGATGAACTCTATTATCTGAGAGAGCAATTTGCACTGTTGGAACCAAGCAAAAATGGAAGCATATCCTCAGAGAACATTAACAAGGCCTTGATGAAGTATGCAACAGATGCCATGAAAGAGTCTCGCATGTCTGATTTTCTTTCCTCGCTGAATGCATTACAGTATAGAAGAATGGATTTTGAAGAATTTTGTGCAGCTGCATTAAGTGTACATCAGCTTGAAGCTCTTGATCGTTGGGAACAACATGCTCGCTGTGCATATGAACTTTTTGAGAAAGATGGAAACAGGGCTATTATGATTGAAGAACTTCCTTCTGAACTTGGACTTGGTCCTTCTATCCCTGTTCATGTTGTTCTTCACGACTGGATCCGGCACACTGATGGGAAGCTAAGCTTTCTTGGATTTGTCAAATTATTACATGGTGTATCTAGCCGAACTGTTGCAAAGGTTCAATGA 1845 0.4412 MGVCNSKPHKPNPYAPSESEAENDSFDPSQIPKTPSTPSNHRRKDDVITGKKSAFFSFYSPSPARFFKQSPSPSVGGSRSANSTPMRFFRRPFPPPSPAKHIKALLARRQGKKSATAGEGEESAEGGDLDKRFGFSKEFSSRLEIGEEVGRGHFGYTCSARFKKGELKGQKVAVKVIPKAKTKVEVLGPLYFEDSFSFSRLWIWESRPSRVGMTTAIAIEDVRREVKILRALNGHNNLVQFYDAFEDQDNVYIVMELCEGGELLDMILSRGGKYTEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYASKDENSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPSFDELPWPSLSTQAKDFVKHLLYKDPRRRISAAQALCHPWIRNYNSAYMRSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISSENINKALMKYATDAMKESRMSDFLSSLNALQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIMIEELPSELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKLLHGVSSRTVAKVQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0689 614 PANTHER SERINE/THREONINE-PROTEIN KINASE 212 608 - -
Lal15g0689 614 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 182 - -
Lal15g0689 614 MobiDBLite consensus disorder prediction 114 129 - -
Lal15g0689 614 MobiDBLite consensus disorder prediction 1 47 - -
Lal15g0689 614 Gene3D Transferase(Phosphotransferase) domain 1 263 442 - -
Lal15g0689 614 SMART serkin_6 143 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0689 614 MobiDBLite consensus disorder prediction 68 85 - -
Lal15g0689 614 Gene3D Phosphorylase Kinase; domain 1 145 262 - -
Lal15g0689 614 MobiDBLite consensus disorder prediction 68 95 - -
Lal15g0689 614 CDD STKc_CAMK 144 435 - -
Lal15g0689 614 Pfam Protein kinase domain 220 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0689 614 Gene3D - 447 601 - -
Lal15g0689 614 SUPERFAMILY EF-hand 450 604 IPR011992 -
Lal15g0689 614 Gene3D - 443 531 - -
Lal15g0689 614 MobiDBLite consensus disorder prediction 107 129 - -
Lal15g0689 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Lal15g0689 614 MobiDBLite consensus disorder prediction 18 37 - -
Lal15g0689 614 PANTHER CDPK-RELATED KINASE 2 212 608 - -
Lal15g0689 614 PANTHER CDPK-RELATED KINASE 2 41 182 - -
Lal15g0689 614 ProSitePatterns Protein kinases ATP-binding region signature. 149 175 IPR017441 GO:0005524
Lal15g0689 614 ProSiteProfiles Protein kinase domain profile. 143 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0689 614 SUPERFAMILY Protein kinase-like (PK-like) 137 455 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0689 Lal-Chr15 4778259 4783566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0689 1 610 EF-hand Containing Proteins AT3G50530 66.667 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lal15g0689 Pkinase 5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0689 K00924 - gmx:100798913 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0724 16 4673891 4679295 Lal15g0689 15 4778259 4783566 LSH
Lal15g0689 15 4778259 4783566 Lal23g1348 23 14280446 14284556 LSH
Lal16g1403 16 10741340 10749474 Lal15g0689 15 4778259 4783566 PCT