Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0679 ATGATAGGCACCTCCTTCTGCAATGCTGATTCTGTGTTTTCAAGAGAAGAGGGAATAGATGTTAGAAAGATGATGGGACATAAAAGGAGCCATTGTTCTGTTGACCAAAGTAGTTATACTTCTATTGCATCTAAAAGGCAAAAAACTGATGTATCTATCACCACAAAGGAGAGGAAGGAGAAGCTCGGCGAACGAATTGTTGCCCTGCAACAACTTGTTTCGCCATATGGGAAGACTGATACATCTTCTGTCCTAAAGGAGGCAATGGAATATATAGGGTTCCTTCATCAGCAAGTAAAGGTGCTTAGTGCTCCTTACCTAGAAAGTTCACCAAAAACCGAGATGCAGGGTATGGAACCATGCAGCATGAGGAGTAGAGGGTTATGTCTTGTTCCTGTCTCATTAACAATGGGAGTTGCTGATAGCAATGGTGCAGATATCTGGGCTCCCATCAAGGCCACTTCACCTAAATTTGAGAAGGATGGTGACTCTCAATTTCATTGA 504 0.4266 MIGTSFCNADSVFSREEGIDVRKMMGHKRSHCSVDQSSYTSIASKRQKTDVSITTKERKEKLGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHQQVKVLSAPYLESSPKTEMQGMEPCSMRSRGLCLVPVSLTMGVADSNGADIWAPIKATSPKFEKDGDSQFH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0679 167 Gene3D - 43 116 IPR036638 GO:0046983
Lal15g0679 167 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 13 150 - -
Lal15g0679 167 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Lal15g0679 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 112 IPR036638 GO:0046983
Lal15g0679 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Lal15g0679 167 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 13 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0679 Lal-Chr15 4677253 4683676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0679 24 166 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 51.205 7.39e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0679 - - gmx:100809747 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0679 15 4677253 4683676 Lal23g0907 23 11290239 11294109 LSH