Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0676 ATGGGAAAGAAGGGGAATTGGTTTGCTGCAATAAAGAGGGTTTTCACATACCACTCCAAGGAACGGGTAGTTAATGATTCGGATGATAAAAGTACAAAAGAGAAGAAGAAAGGAAAACTAAGGCATGGAGAGACCAATTCTTTCATTCCTCTCTTCAGAGAGCCAAGCAGCATTGAGAAAATCTTTGCGGACTTTGAAAGAGAGCAACAAATATTTGCTGCTAGGCCTCCTACAACCTCTCAGCCACCTAAAACACAACCTTTTGTCCCTCCTAGAGCTGCTTCTCCACGGCCTCCGTCTCCAAGGCCACCATCTCCACGACCGACCTCTCCCAAAGCTGCATCCTCACGGATTGTTCATCGCACCAAGGAGGTTGGCTACAGACCAGAACCAACTTTGAAGAACCAGCATGCTTCTGCAACTAAGGTGCAGGCAGTTTTTAGAGGTTATATGTCCAGGAAGAGTTTTAGAGCTCTAAAGGGTTTGGTGAGGCTTCAAGGAGTGGTAAGAGGGCAGAATGTGAAGAGGCAGACAGTTAATGCCATGAAACATATGCAGCTTTTGGTACGAGTTCAATCTCAGATTCGATCTCGGAGGATTCAGATGCTAGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGACAATGCAAGTACGTTGGGAAAATTGTCTGAGGCACATGGAGACTGGGATGATAGCTTACTGACAAAGGAGGAAAGAGAGGCAAGGTTGCAGAGAAAGGTGGAAGCAATCCTCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAAGGCACTCCAAAATCGAATCAAACACCGGTATCAGATATGCAATCCAGCGGATTTCGGTGGTGGTGGAACTGGTTGGAAAGTCAAGTGCCAGCAGCAGCAGCAAATGGACAAGAAAGACAAGTCTTGAAGAATTTCAAACTCACACCTCCTAGACCATACTCAGAACAAAAGACTAGTCCAAGACCAACCTCAAGCACTCCTTTGCAGCATCATTTTGCCTTTGAAAATATGGACACACCAACCCCAAAATCCACCAAGTCAACAATAGTTACATTCAGAACTCCACAAAGAAACACCTCAAAATACTTAAGGCCAAGGGCTATAGGATCACATTCACCTTTTGATATGCTACTAAAGGATGATGATAGTCTCACTAGCTGCCCTCCATTTTCAGTGCCAAATTACATGGTTCCAACGCTTTCGGCTAAGGCAAAAGCGCGCACGAATAGTAATCCAATAGAAAATTTTGGTGGGACTCCAACCAGTGAATCATCACAGAGAAGGTCTTCATTTCCTTTGTCCCAAGGCATTGGATCATTTAAATGGACTAAAGGGTCATTGTTCACAAACAAGGATTCTAGCTCTAAGAGGGTTCAAGATAAATATGAGTCATTTGAAACTTTAGGGAACATGAGTGTGGATTCAACGGTATCTATGCCAGCAACAGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 1506 0.4382 MGKKGNWFAAIKRVFTYHSKERVVNDSDDKSTKEKKKGKLRHGETNSFIPLFREPSSIEKIFADFEREQQIFAARPPTTSQPPKTQPFVPPRAASPRPPSPRPPSPRPTSPKAASSRIVHRTKEVGYRPEPTLKNQHASATKVQAVFRGYMSRKSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIRSRRIQMLENQARYQAEFKNDNASTLGKLSEAHGDWDDSLLTKEEREARLQRKVEAILKRERAMAFAYSHQLWKGTPKSNQTPVSDMQSSGFRWWWNWLESQVPAAAANGQERQVLKNFKLTPPRPYSEQKTSPRPTSSTPLQHHFAFENMDTPTPKSTKSTIVTFRTPQRNTSKYLRPRAIGSHSPFDMLLKDDDSLTSCPPFSVPNYMVPTLSAKAKARTNSNPIENFGGTPTSESSQRRSSFPLSQGIGSFKWTKGSLFTNKDSSSKRVQDKYESFETLGNMSVDSTVSMPATVGRKPFTRFV 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0676 501 Pfam IQ calmodulin-binding motif 137 157 IPR000048 GO:0005515
Lal15g0676 501 PANTHER IQ-DOMAIN 13 1 498 - -
Lal15g0676 501 MobiDBLite consensus disorder prediction 21 43 - -
Lal15g0676 501 ProSiteProfiles IQ motif profile. 136 164 IPR000048 GO:0005515
Lal15g0676 501 SMART iq_5 135 157 IPR000048 GO:0005515
Lal15g0676 501 MobiDBLite consensus disorder prediction 21 48 - -
Lal15g0676 501 MobiDBLite consensus disorder prediction 313 336 - -
Lal15g0676 501 Pfam Protein of unknown function (DUF4005) 324 446 IPR025064 -
Lal15g0676 501 MobiDBLite consensus disorder prediction 73 125 - -
Lal15g0676 501 PANTHER IQ-DOMAIN 5-RELATED 1 498 - -
Lal15g0676 501 MobiDBLite consensus disorder prediction 418 441 - -
Lal15g0676 501 MobiDBLite consensus disorder prediction 320 336 - -
Lal15g0676 501 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0676 Lal-Chr15 4646060 4651033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0676 1 501 IQD Protein Family AT3G59690 50.272 1.50e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0676 - - lang:109331805 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0676 15 4646060 4651033 Lal23g0910 23 11308291 11312749 LSH