Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0672 ATGGAAGGAGGAGCTGCTCCGCCTGCTGACGCCGTCATGTCGGACGGAGCGCCGCCACAACCACCGCCACCACCGCATCCAGACCCACAACGATATCAGCAATATCAGCATCCGGTGCCGGGAAATGGGGTAGAGAATATTCCGGCGATGTTGAGCCACGGTGGAAGGTTCATTCAATACAACATTTTCGGTAACATATTTGAAGTTACTGCGAAGTACAAACCCCCCATCATGCCAATCGGAAAAGGGGCTTACGGTATCGTTTGCTCTGCCCATAATTCTGAGACGAATGAGCAAGTTGCTATCAAGAAGATTGCTAATGCATTTGACAACAAAATTGATGCCAAGAGGACTCTCCGAGAAATCAAACTGCTTCGCCACATGGATCATGAAAATGTTGTTGCAATCAGGGATATAGTGCCACCATCACAAAGGGAGTATTTTCTGTATCAAATCCTCCGTGGATTGAAGTACATACACTCTGCAAATGTTCTGCATAGGGACTTGAAACCTAGCAACCTTCTCCTGAATGCCAATTGTGACCTCAAAATTTGTGATTTTGGACTGGCTCGTGTCACCTCTGAAACTGATTTTATGACTGAATATGTTGTTACAAGATGGTACCGTGCACCAGAGCTTCTGTTAAACTCTTCTGACTACACAGCAGCAATTGATGTATGGTCTGTTGGTTGTATTTTCATGGAGCTGATGGATCGAAAGCCATTGTTTCCTGGCAGAGATCATGTGCATCAGTTGCGTTTACTTATGGAGTTGATTGGCACTCCATCAGAGGCTGATTTGGAGTTTCTGAATGAAAATGCTAAGAGATACATTAGACAACTACCTCATTACCACCGCCAATCTTTCCAAGAAAAGTTTCCGCAAGTCCACCCTGCAGCTCTAGATCTTGTTGAAAGAATGTTAACCTTTGATCCTAGACAAAGGATTACGGTTGAAGATGCACTGGCACACCCATACCTAACATCTCTGCATGACATTAGTGATGAACCTGTGTGCATGACTCCCTTCAGCTTTGACGTAGAGCAACATGCTTTGTCTGAGGAACAGATGAAGGAACTGATATACCGGGAAGCTATAACATTTAACCCAGAGTATCAGCAGTATTAG 1128 0.4477 MEGGAAPPADAVMSDGAPPQPPPPPHPDPQRYQQYQHPVPGNGVENIPAMLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAHNSETNEQVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPSQREYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLEFLNENAKRYIRQLPHYHRQSFQEKFPQVHPAALDLVERMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDVEQHALSEEQMKELIYREAITFNPEYQQY 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0672 375 Pfam Protein kinase domain 143 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0672 375 SUPERFAMILY Protein kinase-like (PK-like) 79 335 IPR011009 -
Lal15g0672 375 SMART serkin_6 74 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0672 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 146 373 - -
Lal15g0672 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 39 146 - -
Lal15g0672 375 ProSiteProfiles Protein kinase domain profile. 74 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0672 375 Pfam Protein tyrosine and serine/threonine kinase 79 141 IPR001245 GO:0004672|GO:0006468
Lal15g0672 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 39 146 - -
Lal15g0672 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 146 373 - -
Lal15g0672 375 MobiDBLite consensus disorder prediction 14 31 - -
Lal15g0672 375 MobiDBLite consensus disorder prediction 1 43 - -
Lal15g0672 375 Gene3D Transferase(Phosphotransferase) domain 1 145 354 - -
Lal15g0672 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lal15g0672 375 ProSitePatterns Protein kinases ATP-binding region signature. 80 104 IPR017441 GO:0005524
Lal15g0672 375 Gene3D Phosphorylase Kinase; domain 1 355 364 - -
Lal15g0672 375 Gene3D Phosphorylase Kinase; domain 1 57 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0672 Lal-Chr15 4612949 4617126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0672 1 374 MAP Kinase Gene Family AT2G43790 76.413 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lal15g0672 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0672 K14512 - csv:101204301 645.195