Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0656 ATGGCTTCCTCCAACAGACACTGGCCAAGCATGTTCAAATCCAAGCCTTACAATCAGTGGCAGCATGAAATCAACTCTTCCTTCATTTCAAATGGTTGTCACAGAAGCACTTACAATACTTCAGCTGCTGGGTGTGATGAAAGGAGTCCTGAACCAAAGCCAAGATGGAATCCAAGACCTGAACAAATTCGCATACTTGAAGCTATTTTCAACTCTGGGATGGTGAATCCTCCAAGAGATGAGATAAGGAAGATTCGGATGCAGTTGCAAGAGTATGGTCAAGTTGGTGATGCAAATGTTTTCTACTGGTTCCAGAACCGCAAATCAAGGAGCAAGAATAAACTTCGCAACCTTCATAATTCAAAGAACCAAACCACACAACAAGCACCACAACAAAACCTTGCCTCTATCTCTCAAATTACAGCACCTTCCTCCTCATCTTCCTCTGAGAAATCCTCTCCAAAAAATCAAATGCTACCCACCAAGGGATTTTCCATTGGCTTCTCACAAAATAATGAAGGGGTTGTGGTGCCTAATTTTTCAACTTCTTCTGTGAACCAAACATATTTTCAGACCTTTAATGAGACAAATTTGCTGCCACCACAATCATCTGAACCTTTCTTCTTTCCTTTGCACCAAAATGGGCAAGGAATACTAGATAATAATAATAATAATAATAATAATAATAATGGTATAGCAACACGGGGATTTTGTTTTTCTGATCACTCTAATGTGGTTCAAGTTCAACCTTATCATTCTTTGCTTCATGTTCAACAACAAAATGTTGGGCCTTGCACCAGTATCAGGAACTATGGTAACTCCTTAAAGAAAGACCAAGATCAAGAGAAGGGAATGAAGTTAATGCATCAACTCCCACAACAAAGTTTCTCTCTCACATCCACTACTCCAACTAATCTCACTACAACCGTTTCTCCTACCATCACTAATGCATCAGTTACTGCTCCATCCACTATAGCTCAACTTCAAGGTGTTGGCGATGTAGCTGGTACAATGAAGACTTTGGTTTTCATAAACGACGTCGCATTTGAGGTTCCAGTGGGGCCCTTCAATGTGCGTGAGGCCTTTGGTATGGAGGCGGTGCTTCTTTACTCCTCCGGCAACCCTGTTCCGACCGACGACTGGGGTGTTACTCTCCATTCCCTCCAATATGGCGCTTATTATTATCTCGTAATAATCTTAAACTTGAATCCTTCTTCAATGACTATTCATCATTAA 1236 0.411 MASSNRHWPSMFKSKPYNQWQHEINSSFISNGCHRSTYNTSAAGCDERSPEPKPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRMQLQEYGQVGDANVFYWFQNRKSRSKNKLRNLHNSKNQTTQQAPQQNLASISQITAPSSSSSSEKSSPKNQMLPTKGFSIGFSQNNEGVVVPNFSTSSVNQTYFQTFNETNLLPPQSSEPFFFPLHQNGQGILDNNNNNNNNNNGIATRGFCFSDHSNVVQVQPYHSLLHVQQQNVGPCTSIRNYGNSLKKDQDQEKGMKLMHQLPQQSFSLTSTTPTNLTTTVSPTITNASVTAPSTIAQLQGVGDVAGTMKTLVFINDVAFEVPVGPFNVREAFGMEAVLLYSSGNPVPTDDWGVTLHSLQYGAYYYLVIILNLNPSSMTIHH 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0656 411 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 400 IPR044557 GO:0003700|GO:0050793
Lal15g0656 411 SUPERFAMILY Homeodomain-like 48 116 IPR009057 -
Lal15g0656 411 SMART HOX_1 51 118 IPR001356 GO:0003677
Lal15g0656 411 Gene3D - 53 118 - -
Lal15g0656 411 MobiDBLite consensus disorder prediction 122 164 - -
Lal15g0656 411 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Lal15g0656 411 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
Lal15g0656 411 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 400 - -
Lal15g0656 411 CDD homeodomain 52 114 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0656 Lal-Chr15 4510316 4512869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0656 1 397 Wox Gene Family AT5G45980 36.855 4.78e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal15g0656 Homeodomain 3.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0656 - - mtr:MTR_2g015000 419.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0656 15 4510316 4512869 Lal15g0656 15 4510316 4512869 ECH