Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0647 ATGTCATGGTGCAATGAGTTAGATGAAGAGAGGGATATTAAACTAATGGCACCCACTATTATTCCTAGAAATAGTAATAATAGTGTTGCTAATGACACAAAACCAACACAAATTACAACCATAACTTGCCCCTCTTGTGGCTATAACATTGAACTCCAAGATCAGGGTGGAATTCTTGATTTGCCTGGTTTACCAGCTGGGGTGAAGTTTGATCCAAATGACTATGAGATATTGGATCATTTGGAAGCAAAAGTGCTCTCTGATGTAACAAAGCTTCATCCACTTATTAATGAGTTCATACCAACTCTTGAAGGAGAGAATGGGATCTGTTATACACACCCTGAAAACCTTCCAGGAGTAAGCAAAGATGGGCATATAAGACATTTCTTTCATAGGCCTTCTAAAGCATACACAACAGGAACAAGAAAAAGAAGAAAAGTTCACACTGATGAAGAGGGAATTGAAACAAGGTGGCACAAAACAGGTAAAACTAGACCAGTTTTTGTTGGTGGTGCAGTGAAGGGTTTCAAAAAGATACTAGTCCTATACACCAACTATGGTAGGCAAAAGAAGCCTGAGAAAACTAACTGGGTCATGCATCAATACCATCTTGGCACTAATGAAGAAGAGAAAGATGGAGAGTTAGTGGTTTCAAAGATTTTCTACCAAACACAGCCTAGACAATGTGGAAATTCAATTATAAAGGACCCATTTGAAAATAAAGGACTTGATCACCAAAGTGTCCATGATGACACTATAATACCTAAAAATAATGCAGCTCTTGTAGATTACTACAACCCTCCTTTCATAAATTATGACCATGTTGAAGGCTCTCTTCAACTCATTCCTAACTTGGTTATGCAAGGTGATACCTCTTCTTTTATTAGATTAGCAACAATGGATGCAAACAAAGGAAGGTTGGACAGAAAATACTAA 936 0.3761 MSWCNELDEERDIKLMAPTIIPRNSNNSVANDTKPTQITTITCPSCGYNIELQDQGGILDLPGLPAGVKFDPNDYEILDHLEAKVLSDVTKLHPLINEFIPTLEGENGICYTHPENLPGVSKDGHIRHFFHRPSKAYTTGTRKRRKVHTDEEGIETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTNEEEKDGELVVSKIFYQTQPRQCGNSIIKDPFENKGLDHQSVHDDTIIPKNNAALVDYYNPPFINYDHVEGSLQLIPNLVMQGDTSSFIRLATMDANKGRLDRKY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0647 311 ProSiteProfiles NAC domain profile. 64 223 IPR003441 GO:0003677|GO:0006355
Lal15g0647 311 Gene3D NAC domain 74 227 IPR036093 GO:0003677|GO:0006355
Lal15g0647 311 Pfam No apical meristem (NAM) protein 65 204 IPR003441 GO:0003677|GO:0006355
Lal15g0647 311 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 293 IPR044799 GO:0003700
Lal15g0647 311 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 293 - -
Lal15g0647 311 SUPERFAMILY NAC domain 59 223 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0647 Lal-Chr15 4458388 4461783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0647 1 233 NAC Transcription Factor Family AT4G28500 69.231 4.36e-118 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal15g0647 NAM 1.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0647 - - gmx:100795920 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0647 15 4458388 4461783 Lal15g0647 15 4458388 4461783 ECH
Lal11g0211 11 1529134 1532544 Lal15g0647 15 4458388 4461783 ECH