LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal15g0645	ATGGTTGATGTTGGTGGTGGAACTGGAACCATGGCTAAGATCATTTGTGAAGCATTTCCTAACCTAAAATACATAGTGTTGGATCTTCCTCAAGTTGTTACAGGCTTAACAGGAACCAACAACTTGAGTTTTGTTGGTGGCAACATGTTTGAATTTGTCCCTCAAGCTGATGCAATTTTAATCAAGCAAGATGAACATGACATGACAGAACTTAAGCTGTTCCTTGACATAGCAATGATGACTGTTCACAATGGAAAAGAGAGAGATGAAAATGAATGGAAGGGACTGTTCAAGAAGGCTGGGTTTGAACACTGCAAGATATATCCCATATTTGGCTTCATATCTCTTATTGAACTCTATCTCTAA	366	0.3852	MVDVGGGTGTMAKIICEAFPNLKYIVLDLPQVVTGLTGTNNLSFVGGNMFEFVPQADAILIKQDEHDMTELKLFLDIAMMTVHNGKERDENEWKGLFKKAGFEHCKIYPIFGFISLIELYL	121

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal15g0645	121	Pfam	O-methyltransferase domain	1	70	IPR001077	GO:0008171
	Lal15g0645	121	Gene3D	Vaccinia Virus protein VP39	67	120	IPR029063	-
	Lal15g0645	121	ProSiteProfiles	SAM-dependent O-methyltransferase class II-type profile.	1	121	IPR016461	GO:0008168
	Lal15g0645	121	PANTHER	O-METHYLTRANSFERASE	66	120	IPR016461	GO:0008168
	Lal15g0645	121	PANTHER	O-METHYLTRANSFERASE	1	67	IPR016461	GO:0008168
	Lal15g0645	121	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	1	119	IPR029063	-
	Lal15g0645	121	Gene3D	Vaccinia Virus protein VP39	1	66	IPR029063	-
	Lal15g0645	121	PANTHER	FLAVONOID 4'-O-METHYLTRANSFERASE	66	120	-	-
	Lal15g0645	121	PANTHER	FLAVONOID 4'-O-METHYLTRANSFERASE	1	67	-	-

Showing 1 to 9 of 9 entries

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal15g0645	Lal-Chr15	4428069	4429500	Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal15g0645	1	119	Monolignol Biosynthesis Gene Families	AT5G54160	33.333	4.65e-15	67.8

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal15g0645	-		K22588	gmx:100818947	154.451

Showing 1 to 1 of 1 entries