Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0645 ATGGTTGATGTTGGTGGTGGAACTGGAACCATGGCTAAGATCATTTGTGAAGCATTTCCTAACCTAAAATACATAGTGTTGGATCTTCCTCAAGTTGTTACAGGCTTAACAGGAACCAACAACTTGAGTTTTGTTGGTGGCAACATGTTTGAATTTGTCCCTCAAGCTGATGCAATTTTAATCAAGCAAGATGAACATGACATGACAGAACTTAAGCTGTTCCTTGACATAGCAATGATGACTGTTCACAATGGAAAAGAGAGAGATGAAAATGAATGGAAGGGACTGTTCAAGAAGGCTGGGTTTGAACACTGCAAGATATATCCCATATTTGGCTTCATATCTCTTATTGAACTCTATCTCTAA 366 0.3852 MVDVGGGTGTMAKIICEAFPNLKYIVLDLPQVVTGLTGTNNLSFVGGNMFEFVPQADAILIKQDEHDMTELKLFLDIAMMTVHNGKERDENEWKGLFKKAGFEHCKIYPIFGFISLIELYL 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0645 121 Pfam O-methyltransferase domain 1 70 IPR001077 GO:0008171
Lal15g0645 121 Gene3D Vaccinia Virus protein VP39 67 120 IPR029063 -
Lal15g0645 121 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 121 IPR016461 GO:0008168
Lal15g0645 121 PANTHER O-METHYLTRANSFERASE 66 120 IPR016461 GO:0008168
Lal15g0645 121 PANTHER O-METHYLTRANSFERASE 1 67 IPR016461 GO:0008168
Lal15g0645 121 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 119 IPR029063 -
Lal15g0645 121 Gene3D Vaccinia Virus protein VP39 1 66 IPR029063 -
Lal15g0645 121 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 66 120 - -
Lal15g0645 121 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0645 Lal-Chr15 4428069 4429500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0645 1 119 Monolignol Biosynthesis Gene Families AT5G54160 33.333 4.65e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0645 - K22588 gmx:100818947 154.451