Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0643 ATGGAGGGCGATGATGTTTCAGAGGGAGACATTAACGACAAAAGGGGTGTCTCAGATGATAACAGTAATGAGAATAATGATGGAAGTCATAGCAAATTTGCGAATTCCAATGAAGGGCTGAGCAAACCCAAGCGCCAGATGAAAACCCCATTTCAGCTTGAAACCCTAGAGAAAGCTTATGCCATGGAGACTTATCCTACGGAGAAGATGAGGTTGGAGCTGTCAGAGAAATTGGGGTTGACGGATCGGCAGTTGCAGATGTGGTTTTGCCACAGGCGGTTGAAGGATAAGAAGGATTTGGCGCCAAAAAAACTGTCGCGGAATGTGGTGGAGCCTTCACTGGAGCCCCCTGCAGAAGACCTGGGATTGGAGCCTGAATCTGGTTATGATTATGGATCAAGGTCGGGTTCGGGTTCAAGCCCGTTTAAACCATCAGAGTTCCGGAGTGTGGTGCCCCGGACCAGTTATTATGAGTCTCCACAGACTGTATTGGAGCTTAGAGCAATTGCTTGTGTTGAGGGACAGTTAGGGGAGCCTTTGAGAGAAGATGGACCCATTTTAGGAGTAGAGTTCGATCCTTTGCCACCAGATGCATTTGGGGCACACATAGCTGTTACAGAACAGAAGCGGCCTACTCTTGGCTATGACAGTGAAATGTATGAAAGACACGATGTTCGAACAAATAAGGCTATGGCAAGGACATTTCATGAATATCAATTTCCACCAAAACAACCTAGCATCAGGTCTGAAGCTTATGGACAATATAGCCAACATAATTTACATGATCCAATGGAGGGTCCTGCCCGAAATCCCTCTTTTACACATGGAGATGAACAGGTACCTAGAATTCATGCTACCCATGGTCCTCGTGTTCGCCTTCCGTCTCAACTAGACAAAGAAGTTATTACCTATCCATCTCCTCCTCAAGAAAACGATGTTACCCCACACCGGGAATCTTACACAAACCTGGATAGTGCCGGAACGTCAACTCACTATACTGATCACCAAATCGCTGAGCCAGAAGGTTCATATGCTGTATCTGATGTACAAATTTTCCATGACAATGCAATGCGAATCGAGAGGAAGCGAAAGAGCGATGATGCCAGAAGTGCAAAGGACGTTGAAGCCCATGACATGAGGACCCGGAAAGAGCTCGAGAAACAAGATAACCTTAGACGAAAGAGTGAAGAGCGAATTAGGAAAGAAATGGAGAGACTAGATCGTGAACGAAAGAAGGAAGAAGAGAGGTTGATGCGTGAGAGACAGCGAGAAGAGGAAAGAACAAAGCGTGAGCAAAAACGTGAAATTGAAAGACGGGAAAAGTATTTGCTAAAAGAAAATTTGAAAGCCGAGAAAATGAGGCAAAAAGAAGAGCTTCGGAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCCCTTGAGAAGGCAACTGCTCGTAGACTTGCTAAGGAATCTATGGAACTTATTGAGGATGAACAGCTGGAATTGATGGAGTTGGCGGCTTCATACAAGGGAATTTCCTCTATTATCCATCTTGATGTTGAGACTTTGCAAAATCTTGAATCATTTAGGGATTCATTGAGTGCTTTTCCACCCAAAAGTGTAAAGGTAAAAAACCCATTTGCTGTACAACCTTGGATCAACTCAGAAGAGAATGTTGGCAACCTTCTCATGGTGTGGAGATTTTTTATTGCTTTTGCTGATGTTCTTGAATTATGGCCATTTACTCTTGATGAGTTCGTGCAAGCATTTCATGACCATGATTCAAGATTGTTGGGTGAGATACATATTGCTCTTCTTAAGGTTATAATAAAAGACATTGAAGATGTCTCAAGGACACCTACAGGATTAGGAATGAACCAAATTGGTACTGCTAATTCTGGAGGTGGCCATCCAGAAATTGTGGAAGGGGCATATTCATGGGGCTTTGACATACGAAATTGGCATAAGCACTTAAACCAGTTGACATGGCCAGAAATTTTCCGACAGATGGCATTATCTGCAGGATATGGACCACAGTTGAAGAAAGGAAGTCTTACATGGTCGTGTGCAAATGATAAAGATGAGTCGCAGAGCAAAAGTATTGAAGATGTCATCTCCACACTTCGTAATGGTTCAGCAGCAGAAAACGCAGTAGCAAAAATGCGGCATAGAGGTCTATTAGCACCTCGAAAATCTAGGCACCGGTTAACTCCTGGAACAGTCAAGTTTGCTGCATTTCATGTTCTGTCACTTGAGGGTAGCAAGGGACTTAATGTGCTAGAGCTTGCAGAAAAAATCCAGAAATCTGGTCTTCGAGACCTGACGACTAGCAAGACACCCGAGGCATCAATTTCTGTTGCTTTGACAAGAGATACTAAACTTTTTGAAAGAATAGCTCCATCAACATATCGTGTGCGTTCTGCCTTTAGAAAGGATCCTGTTCATGCTGAGTCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGATTTGTCGCTGGTGAAGGTGCTGATGATGTTGAAAGAGAAGAAGATTCAGAAAGCGATGAAGTTGATGAGGACCCTGAAGTTGATGATTTGGTAAATCCTGCAAGCGCTAAGAGAACATCTGAACAGAGTGCTGATTTCACATCATATGGAAATGAAAATTTGGGTCACAATGTAGAAGTTATTCAAGATGAGTTTCATAAGGACCTGCCTTGTTTCTCAGAGAGTGTTTCCAGGAGTGCTGATTGTCCAGTTGCTGTTGTGGGACAACCTGCTGCTTCTGAGGATCTGAATGCTGGAAATGTTAAAGAAAATACGGAAATTGATGAAAGCAAGTGTGGAGAGTCATGGGTTCAAGGTCTCTCAGAAGGAGAATATTCTGATCTCAGTGTCGAGGAGCGTCTAAATGCTCTTGTTGTACTGGTTGGTATGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTTTGAAGAAGCAAATGTGGGCAGAAGCTCAGATAGATAAAGTTCGCTCGAAAGATGATTATCTTAGTAAATCAGATTTTCCATCAATCAATGGGAATACAGTTGAAACTCAATTCACCTGTCCTGCTGTGGAGGGCAACCAAAGCCCATTGCTTGACATTAATATTGACAATAATAATAATGAGGCATTGTCCCTCACTCCAGAAAACCAAAAGGCGACTCCTGCTGCACAGAGCTTGTCTTTTCAGCCCTGGTTGATTCAAGATCCTTGCACAAGTCAAGATAACCCTCAGGCTGCGCTATCTTTGCAATATTCGAAAAGGTCACGTTCTCAGTTGAAATCTTATATTTCCCACATAGCAGAGGAGATGTATGTCTATAGGTCCCTACCTCTGGGCCAAGATCGCAGACGTAATCGGTATTGGCAGTTTGTTGCATGTGCTTCTTGCAATGATCCTGGTGCTGGCAGGATCTTTGTTGAATACCTTAATGGCAAATGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGCTCTTTTGAATTCATTGGATTCACGTGGGATCAGGGAATCTCATTTGCGCATAATGTTGCAAAAGATTGAGAACTCCTTCAAAGAAAATGTTCGAAAGAATGCACATGTTAATGTTGGAAGCATCGGTGAAACTTCTATTAAAAATGAAGCTGATGAAACAGATTCAAGTCCTGATTGTCATACTGGGTTTGACAGTCCTAGCAGTACTCTTTGTGGCTTGAACTCTGATACTTCAGAAACTTCTTTGTCCTTCAAAATTGAGCTTGGGAAAAGTGAGAGCGAGAAGAAAGCTGCCTTGAAAAGGTATCAAGATTTCCAAAAATGGATGTGGAGAGAATGCTATAAATCATCAATATTGAGTGCAATGAAAAGTGGTAAAAAGAGATGCAAACCTCAGGTTGACATCTGTGATACCTGTCTCAACCCTTATTTCTTTGAAGACTCCCATTGCAATTGTTGCCACCAACCGTTTCCATCACATAATGGATTTAATTTTTCTAAGCATGCATTTCAATGTGGAGACGAGTTGTCCAAAGATATTTGTATTTTGGATTCTTCTCTTCCCTTGCAGACAAGATTGCTGAAGGCCCTGCTAGCTTATATTGAGGCATGTGTTCCGCTCGAGGCACTTAATTTAATTTGGACAGAAGATATTAGGAGGCGTTGGGGTTTGAAGTTGAGCAAATCAAATTCTGTTGAGGAACTTTTACAGATATTGACCCTATTTGAGAGAGCATTACAGCGAAATTTTCTATCTTCAAACTTCTCTACAACGGAAGAATTGTTGGGATCAAGCAGTCTGTCTCAGAGTGCTGGAGATGCTTCTGCTGATCCCGAATCGGTTACTTTACTTCCATGGGTTCCACATACCACTCCAGCTGTGTGTCTCAGACTTTTCGAGTTTGATGCATCCATTAGCTACATACCAGTTGAGAAACCTGAGTCTTTTCTGGAAAAAGAGGCTAGAGAATACATAAAGCTTCCTTCAAGATATAGTCCTTTAAAATCTGGTAGAGTGGTTGAACCATCAGATTTGAATCATGATGAATTCATGAAAGTTAAATCTGCTCATATGAAAATTGTAGGAAGCGGCAATAAACGTGGACGAGGGACTCATGACAAAGGACGGGGTAAAAAGCTATCCAAAGGAATGCATCATTCAAAACAAGATACTGGTCGGCGTACTGTTAAAGTCACCGAGAATCTAAGTCAAAGATTAAAACAGCAGGGAAGAGGGGCACAAGGAAAAGGCGGTGGACGTGGCCGCCGAACAGTCAGGAAAAGGAGAGTGGAAAAGAGGGCAGTTGAAGATTTGTTGTTGAGCCCAAGGGATACTACTACCTCTCAGAGCTCCAAGATTGGTAGAGAACCATTGAGAAACATGTATGAGGAATGGGTTGATGATGAAAAGGGAAGTCCCATCCACATTGGGCCTTCTGCTGATGTTAGTAACAGCACTGAAGATGTTGAATCTGATGACAATGGCCAAGCAGTGGAATATGATCAAGGAAACTGGGAGATAGGTTTTAATGGTAACCCAAGCAGATGGAGCAGAGATTTGGTTGGAATGAGTGATGAAGATATGGAAGCTTCTGAAGATGAAAATAATATTATTGAAGACGATGAGGATGACGATGAGGATGACGATGATGACGACGATGATGATTCAGAGGCAGATATTATGAGTGAGGATTCAGATGGTGTGGCTAATGGAGTTGTAAATGTACAAGGTTCAGACTCCTCTGACTCTGAACAATCTTCTGATTAG 5265 0.4239 MEGDDVSEGDINDKRGVSDDNSNENNDGSHSKFANSNEGLSKPKRQMKTPFQLETLEKAYAMETYPTEKMRLELSEKLGLTDRQLQMWFCHRRLKDKKDLAPKKLSRNVVEPSLEPPAEDLGLEPESGYDYGSRSGSGSSPFKPSEFRSVVPRTSYYESPQTVLELRAIACVEGQLGEPLREDGPILGVEFDPLPPDAFGAHIAVTEQKRPTLGYDSEMYERHDVRTNKAMARTFHEYQFPPKQPSIRSEAYGQYSQHNLHDPMEGPARNPSFTHGDEQVPRIHATHGPRVRLPSQLDKEVITYPSPPQENDVTPHRESYTNLDSAGTSTHYTDHQIAEPEGSYAVSDVQIFHDNAMRIERKRKSDDARSAKDVEAHDMRTRKELEKQDNLRRKSEERIRKEMERLDRERKKEEERLMRERQREEERTKREQKREIERREKYLLKENLKAEKMRQKEELRKEKEAERRKAALEKATARRLAKESMELIEDEQLELMELAASYKGISSIIHLDVETLQNLESFRDSLSAFPPKSVKVKNPFAVQPWINSEENVGNLLMVWRFFIAFADVLELWPFTLDEFVQAFHDHDSRLLGEIHIALLKVIIKDIEDVSRTPTGLGMNQIGTANSGGGHPEIVEGAYSWGFDIRNWHKHLNQLTWPEIFRQMALSAGYGPQLKKGSLTWSCANDKDESQSKSIEDVISTLRNGSAAENAVAKMRHRGLLAPRKSRHRLTPGTVKFAAFHVLSLEGSKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYRVRSAFRKDPVHAESILSEARKKIQIFENGFVAGEGADDVEREEDSESDEVDEDPEVDDLVNPASAKRTSEQSADFTSYGNENLGHNVEVIQDEFHKDLPCFSESVSRSADCPVAVVGQPAASEDLNAGNVKENTEIDESKCGESWVQGLSEGEYSDLSVEERLNALVVLVGMANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKVRSKDDYLSKSDFPSINGNTVETQFTCPAVEGNQSPLLDINIDNNNNEALSLTPENQKATPAAQSLSFQPWLIQDPCTSQDNPQAALSLQYSKRSRSQLKSYISHIAEEMYVYRSLPLGQDRRRNRYWQFVACASCNDPGAGRIFVEYLNGKWRLIDSEEAFDALLNSLDSRGIRESHLRIMLQKIENSFKENVRKNAHVNVGSIGETSIKNEADETDSSPDCHTGFDSPSSTLCGLNSDTSETSLSFKIELGKSESEKKAALKRYQDFQKWMWRECYKSSILSAMKSGKKRCKPQVDICDTCLNPYFFEDSHCNCCHQPFPSHNGFNFSKHAFQCGDELSKDICILDSSLPLQTRLLKALLAYIEACVPLEALNLIWTEDIRRRWGLKLSKSNSVEELLQILTLFERALQRNFLSSNFSTTEELLGSSSLSQSAGDASADPESVTLLPWVPHTTPAVCLRLFEFDASISYIPVEKPESFLEKEAREYIKLPSRYSPLKSGRVVEPSDLNHDEFMKVKSAHMKIVGSGNKRGRGTHDKGRGKKLSKGMHHSKQDTGRRTVKVTENLSQRLKQQGRGAQGKGGGRGRRTVRKRRVEKRAVEDLLLSPRDTTTSQSSKIGREPLRNMYEEWVDDEKGSPIHIGPSADVSNSTEDVESDDNGQAVEYDQGNWEIGFNGNPSRWSRDLVGMSDEDMEASEDENNIIEDDEDDDEDDDDDDDDDSEADIMSEDSDGVANGVVNVQGSDSSDSEQSSD 1754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0643 1754 MobiDBLite consensus disorder prediction 307 329 - -
Lal15g0643 1754 CDD homeodomain 44 98 IPR001356 GO:0003677
Lal15g0643 1754 MobiDBLite consensus disorder prediction 1 52 - -
Lal15g0643 1754 ProSiteProfiles DDT domain profile. 549 608 IPR018501 -
Lal15g0643 1754 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 12 1754 IPR044977 GO:0006357
Lal15g0643 1754 Pfam DDT domain 550 605 IPR018501 -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 1735 1754 - -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 22 43 - -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 1607 1621 - -
Lal15g0643 1754 ProSiteProfiles HARE-type HTH domain profile. 732 801 IPR007759 GO:0006355
Lal15g0643 1754 MobiDBLite consensus disorder prediction 1692 1728 - -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 257 279 - -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 834 855 - -
Lal15g0643 1754 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 940 981 IPR028942 -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 1562 1576 - -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 302 329 - -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 360 398 - -
Lal15g0643 1754 Pfam HB1, ASXL, restriction endonuclease HTH domain 732 800 IPR007759 GO:0006355
Lal15g0643 1754 MobiDBLite consensus disorder prediction 831 873 - -
Lal15g0643 1754 Coils Coil 445 476 - -
Lal15g0643 1754 ProSiteProfiles 'Homeobox' domain profile. 39 99 IPR001356 GO:0003677
Lal15g0643 1754 MobiDBLite consensus disorder prediction 1635 1754 - -
Lal15g0643 1754 Coils Coil 385 439 - -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 413 434 - -
Lal15g0643 1754 Pfam Homeodomain 42 98 IPR001356 GO:0003677
Lal15g0643 1754 PANTHER HOMEOBOX DOMAIN PROTEIN 12 1754 - -
Lal15g0643 1754 SUPERFAMILY Homeodomain-like 28 98 IPR009057 -
Lal15g0643 1754 Gene3D - 26 100 - -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 107 146 - -
Lal15g0643 1754 SMART HOX_1 41 103 IPR001356 GO:0003677
Lal15g0643 1754 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1116 1188 IPR028941 -
Lal15g0643 1754 SMART testlast3 549 608 IPR018501 -
Lal15g0643 1754 MobiDBLite consensus disorder prediction 1528 1622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0643 Lal-Chr15 4406389 4417132 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0643 7 1749 Homeobox Transcription Factor Family AT1G28420 46.777 0.0 1281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lal15g0643 WSD 7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0643 - - ahf:112733536 2232.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0643 15 4406389 4417132 Lal15g0643 15 4406389 4417132 ECH
Lal15g0643 15 4406389 4417132 Lal5g1716 5 19283763 19294601 PCT
Lal15g0643 15 4406389 4417132 Lal3g0097 3 586951 597782 PCT
Lal15g0643 15 4406389 4417132 Lal11g0207 11 1479822 1489647 PCT
Lal5g1716 5 19283763 19294601 Lal15g0643 15 4406389 4417132 PCT
Lal3g0097 3 586951 597782 Lal15g0643 15 4406389 4417132 PCT
Lal11g0207 11 1479822 1489647 Lal15g0643 15 4406389 4417132 PCT