Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0642 ATGGGTGTGGACTACTATAAGATTTTGCAAGTTGACAAGAATGCTAATGATGAAGACTTGAAGAAATCTTACAGAAAACTTGCCATGAAATGGCACCCTGATAAGAACCCAAACAATAAGAAAGATGCTGAAACTAAATTCAAACAGATATCTGAAGCCTATGAGGTCCTAAGTGACCCTCAGAAGAGAGCAATTTATGATCAGTATGGAGAAGATGGACTTAAAGGCCAAGTGCCACCTCCGGATGCGGGTGGAGCTTCATTCTTCCAAAGTGGAGATGGTCCTACCACCTTTAGGTTCAATCCAAGAAATGCAAATGACATTTTTGCTGAGTTTTTTGGATTTTCAAGCCCGTTTGGTGGAATGGGAGGCGGTGGCGGCAGTGGAGGCATGAGGGGTGGGACAAGGACATTTGGTGGAGTATTTGGTGATGATATATTTAGTTCATTTGGGGATGGCAGTGGCAGGCCAATGAGTCATGGTCCACGAAAGGCGTCTTCTATTGAAAATATGCTGCCTTGTAGCCTTGAGGATCTCTATAAAGGGACCACCAAAAAGATGAAGATCTCAAGGCAAATTGCAGATGCTAGTGGTAAAACTATGCCCGTGGAGGAAATCTTAACCCTTGAAATCAAACCTGGCTGGAAAAAGGGAACGAAAATCACCTTCCCAGAGAAAGGAAATGAGCAACCAAATATTATTCCTGCAGATCTTGTATTCATTATCGATGAGAAACCTCACAGTGTATTTACAAGGGATGGCAATGATCTTGTTGTCACACAAAAAGTATCACTGGCAGAAGCTCTTACAGGATTCAGTGTCCATCTTACAACTCTTGATGGTAGGAATCTGACCATTCCCGTAAACAATGTAATTCATCCGAACTATGAAGAGGTTGTACCAAGGGAAGGTATGCCAATTCCAAAAGATCCTTCGAAAAAGGGTAATCTTAGGATCAAGTTCAACATCAAATTCCCAACTAGGTTAACATCGGAACAGAAAGCCGGAATTAAAAAGCTTATTGCACCATGA 1032 0.4196 MGVDYYKILQVDKNANDEDLKKSYRKLAMKWHPDKNPNNKKDAETKFKQISEAYEVLSDPQKRAIYDQYGEDGLKGQVPPPDAGGASFFQSGDGPTTFRFNPRNANDIFAEFFGFSSPFGGMGGGGGSGGMRGGTRTFGGVFGDDIFSSFGDGSGRPMSHGPRKASSIENMLPCSLEDLYKGTTKKMKISRQIADASGKTMPVEEILTLEIKPGWKKGTKITFPEKGNEQPNIIPADLVFIIDEKPHSVFTRDGNDLVVTQKVSLAEALTGFSVHLTTLDGRNLTIPVNNVIHPNYEEVVPREGMPIPKDPSKKGNLRIKFNIKFPTRLTSEQKAGIKKLIAP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0642 343 MobiDBLite consensus disorder prediction 73 97 - -
Lal15g0642 343 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lal15g0642 343 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lal15g0642 343 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lal15g0642 343 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lal15g0642 343 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lal15g0642 343 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 341 - -
Lal15g0642 343 CDD DnaJ_C 172 329 - -
Lal15g0642 343 Pfam DnaJ C terminal domain 170 326 IPR002939 -
Lal15g0642 343 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE 1 341 - -
Lal15g0642 343 SUPERFAMILY Chaperone J-domain 3 127 IPR036869 -
Lal15g0642 343 CDD DnaJ 4 59 IPR001623 -
Lal15g0642 343 Pfam DnaJ domain 4 67 IPR001623 -
Lal15g0642 343 Gene3D DnaJ domain 3 123 IPR036869 -
Lal15g0642 343 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lal15g0642 343 SMART dnaj_3 3 62 IPR001623 -
Lal15g0642 343 Gene3D - 166 245 - -
Lal15g0642 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 169 247 IPR008971 GO:0006457|GO:0051082
Lal15g0642 343 Gene3D - 247 327 - -
Lal15g0642 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 249 335 IPR008971 GO:0006457|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0642 Lal-Chr15 4401327 4404080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0642 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 2.32e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0642 K09510 - zju:107425032 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0642 15 4401327 4404080 Lal15g0642 15 4401327 4404080 ECH