Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0635 ATGGAGAAACAGTCGAACGAGACTCTAGAGGAAGAAATGCTTACTAGCGATGGAAGCAACCATGAGCTTCCAGAAGATGAAGTCCAATCTGATTTGAGCGAAGAGGATGATGAAATAGATGAGTTTCTAGATTTGTCAAATGTTCGCGAGTTTGTTGAGTGCCCTATCTGCCTAGGCATTATTCAGAAAACCAAAGCGATAAAGGAATGTCTGCATCGCTTTTGCGGAGAATGCATAGAGAAATCTATGCGTCTTTGTAACCATGAATGTCCAATTTGTCGCACACATTATGCTGGCCAATCCTCTTTGAAAGAGGACCCTAACTATGATACCCTTATTGCTTCTATATATCCTCGTATTGAAAAGTATGAGGAGGAGGAATTGTCCTTACATGAAGATGGAAAGAAAGACGACAAGAAGGAGTACAATCTTCTCAGTCGTACGCGTGTGACTGAGTCAGCACACGGTTGGAGGGAGGGGAAAAACTCTCCACACAGCTTGACTCGGTCTTTGAGGAAGAGGATGCTCGTGGGTCCTCCAGACCGTAAGATGGAGGCACATGACCACTACCCTTTTGGGTCGTCGGATGAAGGGGCCAATGGATACTTCAGACTATAA 618 0.4466 MEKQSNETLEEEMLTSDGSNHELPEDEVQSDLSEEDDEIDEFLDLSNVREFVECPICLGIIQKTKAIKECLHRFCGECIEKSMRLCNHECPICRTHYAGQSSLKEDPNYDTLIASIYPRIEKYEEEELSLHEDGKKDDKKEYNLLSRTRVTESAHGWREGKNSPHSLTRSLRKRMLVGPPDRKMEAHDHYPFGSSDEGANGYFRL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0635 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 124 IPR013083 -
Lal15g0635 205 ProSitePatterns Zinc finger RING-type signature. 70 79 IPR017907 -
Lal15g0635 205 CDD RING-HC_RING1_like 54 94 - -
Lal15g0635 205 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RING1A-RELATED 5 139 - -
Lal15g0635 205 SUPERFAMILY RING/U-box 45 125 - -
Lal15g0635 205 ProSiteProfiles Zinc finger RING-type profile. 54 94 IPR001841 -
Lal15g0635 205 MobiDBLite consensus disorder prediction 1 37 - -
Lal15g0635 205 MobiDBLite consensus disorder prediction 1 27 - -
Lal15g0635 205 Pfam Zinc finger, C3HC4 type (RING finger) 53 93 - -
Lal15g0635 205 SMART ring_2 54 93 IPR001841 -
Lal15g0635 205 PANTHER OS11G0578200 PROTEIN 5 139 IPR044592 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0635 Lal-Chr15 4372584 4375332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0635 52 172 C3H Transcription Factor Family AT2G30580 28.125 9.18e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0635 K10695 - zju:107425269 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0635 15 4372584 4375332 Lal15g0635 15 4372584 4375332 ECH