Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0611 ATGTACGTTGCTTCCATGCGAAAGTCTTTCAAGGATTCATTAAAACTCCTTGAAGCTGATATCCAACATGCTAATACCTTGGCGTCAGATTATCCAAGGGAGTATGATGGTGCATGCCTTCAGATGAGAATGTCATACAGTCCCGCTGCACACTTGTTTCTTTTTTTGGTGCAATGGACTGATTGTCATCTAGCCGGAGCTCTTGGACTGCTTAGAATCTTAATTTACAAGGTGTACGTGAACGGGACAACCACCATGTCTATTCAAGAAAGAAGAGCAAGTATTAGAGAATTCTATGCGATCATTTATCCTTCTTTGATGCAACTTCAAAAAGGCGTCACCGATACAGAAGATAAAAAGCAAAAGGCTGTATGCGTGGAGAAGTATCATAGAAGAGATGATGATGACTATAGGCAATGCTCTGACGTAGACATTGAAAGAGAAGATGAATGTGGAATATGCATGGAGACGAATAGTAAGATTGTGTTGCCCAACTGCAATCATGCCATGTGCCTGAAATGTTACCGAGAGTGA 534 0.412 MYVASMRKSFKDSLKLLEADIQHANTLASDYPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVNGTTTMSIQERRASIREFYAIIYPSLMQLQKGVTDTEDKKQKAVCVEKYHRRDDDDYRQCSDVDIEREDECGICMETNSKIVLPNCNHAMCLKCYRE 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0611 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 177 IPR013083 -
Lal15g0611 177 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Lal15g0611 177 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF8-LIKE 4 177 - -
Lal15g0611 177 SUPERFAMILY RING/U-box 146 176 - -
Lal15g0611 177 PANTHER RING FINGER PROTEIN 41, 151 4 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0611 Lal-Chr15 4243526 4246690 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0667 16 4334224 4338965 Lal15g0611 15 4243526 4246690 LSH
Lal15g0611 15 4243526 4246690 Lal23g0950 23 11578293 11583020 LSH