Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0587 ATGGGTGAGGAAGACTTCACCGGAGAATCTAAACCCTTTCACAGCTCGCCAGAACAACTCACCGGAATCTCCAACCTCCGGAAAACCATCGATTTCATCTCCTCCTTGATCCCCCTCTCTCACTCCGTCCGTGTCTTCGCCGGAAAATGGCAACTAATTCGTAACAAACTGGGGGAGCTTTACTCCGGCCTCATCGCCGCCGAGAACTTCGATTCCGGTGAGAATCCATCACTCTCTGGCGTGGTCCTTTCTATATTGGCCACAACAAGCGAGTGCTACGATCTCGCAAAACGGTGCGTCAATCTTTCATACAGTGGGAAGCTTCTTATGCAGAGTGATTTGGATGTGATTTTTGCAAAGTTTGATAATCACGTTAAGAAGCTATCTGAGATTTACAAGAAGGGTATTTGGTCAAATGGGTATGCACTTGTTGTGTCAAAACCGAGTCTTGGTGCTTCTAAGGAGGATATGAGGTTTTACATAAGGGACTTGTTGAGTAGAATGAAGATTGGTGATTTGGGTATGAAGAAGCAAGCTTTGATGAATCTTTATGATGTTGTCGTTGAGGATGAGAAGTATGTTAAAGTGATTGTTGATGTTGGTGATGTTGTTCATGTTTTGGTGGGGTTTTTAAGTTCCATTGAGGTGGCAATTCAAGAAGAGAGTGCTAAGGTCGTTTCTGTTATTGCAGGTTTCGATTCATATAAAGGGGTTTTGGTTGCTGCTGGGGTTATTGCACCTTTGGTAAGGGTTTTGGATTGTGGGAGTGAGGCAGGGAAGGTTGGTGCTGCGAGTTGTTTGATGAAATTGACTGAGAATTCGGATAATGCGTGGTGTATTTCGGCACATGGAGGTGTCACTGCTTTGCTGAAGATTTGTGGTGAAGATTGTAAAGGGGATTTGGTTGGTTTTGCTTGTGGGGTGTTGAGGAATCTTGTTGGTGTCGAAGAGATAAAGAGGTTTATGATTGAGGAGAGTGCTGTGTCCACTTTTATTAGGCTTCTGAGGTCCAATGAGGAAGTAATTCTGGTGAACTCAATAGGGTTCATTCAGAGTATTATCTATGGCGATGAGCTGGTTCGGGAAATGGTGATTAGAGAAGGTGGAAATCGTGCATTGTTGAGTGTGTTGGAACCTAAATTGAGTTATTCATCTAAGACAAGGGAGATAGCAATGAGGGCTATTGAGAATTTGTGTTTTTCTTCATCCACTAGTGTAAGTATTTTGATGAGTTATGGTTTTGTTGATCAGCTGTTATATTATGTTAGAAATGGTGAAGTTTCAATGCAAGAGTTGGCTCTGAAAGTGGCTTTTAGATTGTGTGGAACATCAGAGGAGGCTAAGAAAGCAATGGGTGATGCCGGCTTTATGGCTGACCTTGTTAAGTTTCTAAACGCAAAATCATTTGAAGTTCGAGAAATGGCAGCCGAAGCACTCTCTGGCATGGTTATGGTATCTAAAAATAGGAAGAGATTTGTGCAGGATGACCATAATATTGCCCTTATTCTGCAATTGCTTGACCCAAAGGAGGGAAATTCAGGTAACAAAAAGTTCTTAATCTCTATCTTAATGTCATTAACAAATTGCACCAGTGGGAGGAAAAAGATTGTTAGTTCTAGTTATGCCAAAAACATAGAAAAACATGCAGAGGCTGAAGTTTCTTCTGATGCCAAGAGACTTGTAAAGAAGCTAACCGCAAACCGGTTCCGCAGTATGCTGAGTGGAATCTGGAACTCATGA 1740 0.423 MGEEDFTGESKPFHSSPEQLTGISNLRKTIDFISSLIPLSHSVRVFAGKWQLIRNKLGELYSGLIAAENFDSGENPSLSGVVLSILATTSECYDLAKRCVNLSYSGKLLMQSDLDVIFAKFDNHVKKLSEIYKKGIWSNGYALVVSKPSLGASKEDMRFYIRDLLSRMKIGDLGMKKQALMNLYDVVVEDEKYVKVIVDVGDVVHVLVGFLSSIEVAIQEESAKVVSVIAGFDSYKGVLVAAGVIAPLVRVLDCGSEAGKVGAASCLMKLTENSDNAWCISAHGGVTALLKICGEDCKGDLVGFACGVLRNLVGVEEIKRFMIEESAVSTFIRLLRSNEEVILVNSIGFIQSIIYGDELVREMVIREGGNRALLSVLEPKLSYSSKTREIAMRAIENLCFSSSTSVSILMSYGFVDQLLYYVRNGEVSMQELALKVAFRLCGTSEEAKKAMGDAGFMADLVKFLNAKSFEVREMAAEALSGMVMVSKNRKRFVQDDHNIALILQLLDPKEGNSGNKKFLISILMSLTNCTSGRKKIVSSSYAKNIEKHAEAEVSSDAKRLVKKLTANRFRSMLSGIWNS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0587 579 Gene3D - 160 568 IPR011989 -
Lal15g0587 579 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 579 - -
Lal15g0587 579 SUPERFAMILY ARM repeat 148 530 IPR016024 -
Lal15g0587 579 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 579 - -
Lal15g0587 579 SMART arm_5 315 355 IPR000225 GO:0005515
Lal15g0587 579 SMART arm_5 190 231 IPR000225 GO:0005515
Lal15g0587 579 SMART arm_5 444 484 IPR000225 GO:0005515
Lal15g0587 579 SMART arm_5 357 400 IPR000225 GO:0005515
Lal15g0587 579 SMART arm_5 273 314 IPR000225 GO:0005515
Lal15g0587 579 SMART arm_5 232 272 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0587 Lal-Chr15 4065029 4066768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0587 161 449 U-box Gene Family AT3G46510 23.906 6.76e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0587 - - gmx:100809382 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0587 15 4065029 4066768 Lal23g0978 23 11771725 11773467 LSH
Lal15g0587 15 4065029 4066768 Lal5g1766 5 19683364 19685082 PCT
Lal15g0587 15 4065029 4066768 Lal11g0143 11 940970 942862 PCT
Lal5g1766 5 19683364 19685082 Lal15g0587 15 4065029 4066768 PCT
Lal11g0143 11 940970 942862 Lal15g0587 15 4065029 4066768 PCT