Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0584 ATGACGTCACATCACCTCCCTGAGTTCGACACTGACTCAGTCACCTCTTCCCCTCGCTCCGACCACTTCCATGAACCACCGCCACGTGTCCGCTTTATGTGCAGCTTCGGCGGCAAGATCCTTCCCCGCCCCCACGACAACCAGCTCCGATACGTCGGTGGCGACACCCGAATCGTCGCCATCCACCGCTCCATCTCCTTCTCCGCACTTCTCCTCAAACTCTTTAAACTCTCAGGCATGACTAACATAACAGTGAAGTACCAGCTTCCAAACGAGGACCTTGACGCGTTGATCTCCGTTACGACGGACGAAGACGTGGAGAACATGATGGATGAATACGACCGCGTCGCACGGAATCAAAACTCGCGATCGGTTCGTCTTCGCCTTTTCCTCTTCCCCGAAACAGAACCTGAACCTTCTCGAACCAACAGCATAAGCTCACTCCTAAACGGTTCAGCAAACCGCGAAAACTGGTTCCTAGACGCACTAAACGGTGGCGTTTCAAGTGGACTTGAACGAGGACGCTCAGAAGCTTCTTCAATGCTTTCGGAAGTACCCGATTACCTATTCGGATTGGATCATAACTCAGACGAAACACAACAACAACAACGTGAACCACGACTCAAGGACCGACCCGTTTTACAAGACAACGTTTCAAATTCGGATCCGGGTTCTCCTGCCCCGATTGTTTCTTCACCGTTTTGTTCTTCATCATCAGCGCCTTCTATCCCAAACCTTCCACCGGTTAAAACTAAACTCTCAAACTCTTTTACCGAGTCAAAGGAAAGTCAAGTTGAAGCTGAAACGGGTGGGCAAATAAACCCGAATCTATACCCGGTTAACCATGTAGTACACTACGCTCCAGATGCTGCTTATTCAGGTCACTCTGTACAAACGATTCCGGTTTATTATATTCCCGGCCCGGTTCAACCTGGTACAGTACCGGTTCAGCCGGTTCCTATTCAGGCACCATATCCATATGTTCAACAACAACCATATCATCACGCAGTTGGACCGGTTCAGGTTCCATATGGGTACCATCATATGGTTCCGGGTTCGGGTCAAATATATGGGAATGGGCCAGGGATAAGGCATTTGACCCCGGAGCATCCATACAGTCCCTCGGCTGCGGTGGTTCATAGCGGAATGAATCAGCATATGTATCAGGCGGCGGCACCAAACTCCGGTGGGGTTCCGATTTATTCGGCAATGACAATGAGAAGTGATGAACAAAATGAAGGTGGAGCAGAATTTGACGGGTCGGGGCACCAGCTCGTTAAATGA 1284 0.5031 MTSHHLPEFDTDSVTSSPRSDHFHEPPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAIHRSISFSALLLKLFKLSGMTNITVKYQLPNEDLDALISVTTDEDVENMMDEYDRVARNQNSRSVRLRLFLFPETEPEPSRTNSISSLLNGSANRENWFLDALNGGVSSGLERGRSEASSMLSEVPDYLFGLDHNSDETQQQQREPRLKDRPVLQDNVSNSDPGSPAPIVSSPFCSSSSAPSIPNLPPVKTKLSNSFTESKESQVEAETGGQINPNLYPVNHVVHYAPDAAYSGHSVQTIPVYYIPGPVQPGTVPVQPVPIQAPYPYVQQQPYHHAVGPVQVPYGYHHMVPGSGQIYGNGPGIRHLTPEHPYSPSAAVVHSGMNQHMYQAAAPNSGGVPIYSAMTMRSDEQNEGGAEFDGSGHQLVK 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0584 427 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 1 415 - -
Lal15g0584 427 SUPERFAMILY CAD & PB1 domains 45 138 - -
Lal15g0584 427 MobiDBLite consensus disorder prediction 214 243 - -
Lal15g0584 427 MobiDBLite consensus disorder prediction 198 212 - -
Lal15g0584 427 CDD PB1_UP2 33 132 - -
Lal15g0584 427 MobiDBLite consensus disorder prediction 1 26 - -
Lal15g0584 427 Pfam PB1 domain 45 133 IPR000270 GO:0005515
Lal15g0584 427 MobiDBLite consensus disorder prediction 190 243 - -
Lal15g0584 427 Gene3D - 50 132 - -
Lal15g0584 427 PANTHER OS05G0427100 PROTEIN-RELATED 1 415 - -
Lal15g0584 427 SMART PB1_new 44 134 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0584 Lal-Chr15 4026188 4027856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0584 19 169 MAP Kinase Kinase Kinase AT3G46920 41.060 1.82e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0584 - - aprc:113858359 539.65