Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0583 ATGTCACCAGAATATGCCATGGAAGGAAATTTTTCAATAAAGTCTGAAGTGTACAGCTTCGGAGTTTTGCTTCTAGAGATTGTTACAGGCAGAAAAAATAGTGGTCAATATGAGGACATTACATGCACAAATCTAGTTGGTCATATATGGAATCTATGGAGAGAAGGCAAAGCCATGGAGATTGTAGATAAATCATTAGGAGAATCATGCTCTGACCATGAAGTCCAAAGATGCATCCAAATTGGGCTTTCATGTGTACAAGATTATGCCTTGGATAGACCATCTATGTCAATAGTTGTTTCTATGTTGGGTAATATTGAATCAACTCTTCCTACACCAAAATACCCTGCATTCATTTTCAAGAAAACTCCACATGATAATTCAGATCCATCAACCAGTGAAGGAATTTATTCAGTAAATGAGGCTACTGTTGTGAACTGA 441 0.3696 MSPEYAMEGNFSIKSEVYSFGVLLLEIVTGRKNSGQYEDITCTNLVGHIWNLWREGKAMEIVDKSLGESCSDHEVQRCIQIGLSCVQDYALDRPSMSIVVSMLGNIESTLPTPKYPAFIFKKTPHDNSDPSTSEGIYSVNEATVVN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0583 146 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Lal15g0583 146 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Lal15g0583 146 SUPERFAMILY Protein kinase-like (PK-like) 1 132 IPR011009 -
Lal15g0583 146 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 145 - -
Lal15g0583 146 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKS1 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0583 Lal-Chr15 4024416 4025021 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0583 1 133 Receptor kinase-like Gene Family AT4G23150 49.265 1.36e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal15g0583 PK_Tyr_Ser-Thr 4.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0583 - - gmx:100812814 243.817