Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0576 ATGAGCCAAATTCTCTTGATTTTGATAATAGGGATTGGTATAGGCTTTCTTGTTGGATTGAGTTTGGCATTTTCAATTTTATTGTGCTTCAAGTGTGGAAGGAAGCAGGAACCGGTGGAGAAGTGTTCTTCTCCGAGAGCAGTGGTCGTTCCTGTTGGTGTCAATGGTGTCAGAGGGGTTGATTCCAGAACAACATCAGCAAACTCCTCTAATGTGGGTCTGGAGTCACCAAGAACTTCTGAGTGGAGTAACATGCCTTTATGGTTGGAAGGACTTAGGAAAAAGAATGTAGTTTCAGCATGTGGAATTCCCAAATATTCTTACAAAGATATACAAAAGGCAACTTCTAATTTCACAACCATCATAGGCCATGGAGCATTCGGCTCTGTTTACAAAGCACAGATGTCTGCAGGTGAGACAGCTGCGGTTAAAGTTCTTGGTACCAATTCAAGACAAGGAGAAGGGGAATTTTTAACAGAGGTCCTATTACTTGGAAGATTACATCACAGGAACCTTGTGGGTTTGGTGGGATATGGTGCAGAAAGAGGACAGCACATGCTACTTTACACTTATATGAGCAACGGCAGTCTTGCTTCTCATTTGCATGGCCAAAAACATGAACCATTGAGCTGGGATGCGAGGCTTAGTATAGCATTGGATGTTGCAAGAGGACTGGAATATCTACATTATGGGGCTGCTCCACCTGTTGTGCACCGTGACATCAAATCGTCTAATATTCTGTTGGACCAGTTTATGAGAGCAAAGGTCACTGACTTTGGGCTTTCCAGACCAGAGATGACCAAACCTCGTGTAACAAATATCAGAGGAACTTTTGGATATCTAGATCCTGAGTATATGTCTACAGGAACGTTCAGTAAGAAAAGCGATGTTTATAGCTTTGGAGTGCTACTGTTTGAGATTATTACTGGAAGGAATCCACAGCAGGGTCTCATGGACTACGTAAAACTAGCAGCCATGGAAGGGGAGGGTACAGTTGGATGGGAGGAAATTGTGGATTCACAACTGAATGGAAACTATGATGTGCACATGCTCAATGATGTGGCTTCACTTGCACTCAAATGTGTGAATGAGGTCTCTAAAAGCCGACCTCCAATGGCGGAAATTGCTCAAGAATTATATCAGTTCCGTAAGAAACTTAATAAAGTTCATAGCAGAACACCTCAAGAACTATCTGGGTTTAGTAGCAAAAATCATAGCAGAAGCAGAATATCTCCTACAGAATCGCAGGAAGTTTGCATTGAGGTGGATCAGCTAAAAGTCCCAGACTATGAATCTAAAGAGTGTGGTTCTTCAATGGAGATGAATAGATTACATATCCGATAA 1344 0.4219 MSQILLILIIGIGIGFLVGLSLAFSILLCFKCGRKQEPVEKCSSPRAVVVPVGVNGVRGVDSRTTSANSSNVGLESPRTSEWSNMPLWLEGLRKKNVVSACGIPKYSYKDIQKATSNFTTIIGHGAFGSVYKAQMSAGETAAVKVLGTNSRQGEGEFLTEVLLLGRLHHRNLVGLVGYGAERGQHMLLYTYMSNGSLASHLHGQKHEPLSWDARLSIALDVARGLEYLHYGAAPPVVHRDIKSSNILLDQFMRAKVTDFGLSRPEMTKPRVTNIRGTFGYLDPEYMSTGTFSKKSDVYSFGVLLFEIITGRNPQQGLMDYVKLAAMEGEGTVGWEEIVDSQLNGNYDVHMLNDVASLALKCVNEVSKSRPPMAEIAQELYQFRKKLNKVHSRTPQELSGFSSKNHSRSRISPTESQEVCIEVDQLKVPDYESKECGSSMEMNRLHIR 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0576 447 MobiDBLite consensus disorder prediction 392 415 - -
Lal15g0576 447 Gene3D Transferase(Phosphotransferase) domain 1 192 406 - -
Lal15g0576 447 SMART serkin_6 116 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0576 447 PANTHER OS01G0253100 PROTEIN 3 394 IPR045271 GO:0004714|GO:0006468
Lal15g0576 447 CDD STKc_IRAK 122 379 - -
Lal15g0576 447 SUPERFAMILY Protein kinase-like (PK-like) 98 380 IPR011009 -
Lal15g0576 447 PANTHER DUAL-SPECIFICITY KINASE DOMAIN PROTEIN 3 394 - -
Lal15g0576 447 Gene3D Phosphorylase Kinase; domain 1 84 191 - -
Lal15g0576 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Lal15g0576 447 ProSiteProfiles Protein kinase domain profile. 116 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0576 447 Pfam Protein tyrosine and serine/threonine kinase 118 379 IPR001245 GO:0004672|GO:0006468
Lal15g0576 447 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0576 Lal-Chr15 3972971 3977902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0576 102 381 Receptor kinase-like Gene Family AT3G19300 44.561 2.62e-77 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lal15g0576 PK_Tyr_Ser-Thr 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0576 - - lang:109332283 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0576 15 3972971 3977902 Lal15g0576 15 3972971 3977902 ECH