Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0570 ATGGCTTCTCGTAACCAGAACAATCCTCCTTGCAGCCCCTCTAATAAAAAAGGTGGTAGAACTGAAGAGTTATTTGCAGACAAGCGTGGAAGAATCGGAGCTGAAAAGATGGAACAACGAGGAGGAGCCGTTGGGAAGGTGAGAGCTCCGCTTTCTTCGGTGAAAGTTCGGTCTGATACTAATGCAGGGAGTGAAATTGGAAGTAATGAGGGGATGGAATGTAGTGTTGTTGAGTTTACAAAAGAGGATGTAGAAGCCTTGTTGAATGAAAAGAGAAAAAAAGGGGATCCCTTTGATAATAAGAAAAAACAGGAGCTGATGGCTGCTTATATCAAGCGGCTTAAGCTTTGTGTTCGATGGTTTATTAAAGTTGAAAATGGCTATGTCCAAGAAAAAGAGAAGCTTCAGTCTGAACTAGAGTCACTTGAGAAGAAGTGCAGTTACACTGAGATTGAGATGAAAAATAAGATGGGGGAGTTGAATGAGACAATATCTGATTTAAGGAGGACAATTACCTCTTTAGAAGAGAGAATCGTGAAGGAAGAATCGGATAAGCTGGAAGCAATTAATTGTTATAAAATAGAAAAGGAAGCCAGAAGTGTAGCTGAGAAAGTTCGGGATGAGAAATCAGCTGAGCTCGAAAAAGTTTTGGATCAGAAATCAGTTGCTGAGCAGAAGGCCATTTCAAATGAGGACTTGTACAACCGATCTCAAGAGTATAACATGAGTTTGCAGCAGTACAATAGTCGTCTTCAGTCAGATCTTGATACTTCTAATGAAGCACATAAGCGACTTGAAATAGAGAAAGCAACCATCGTTGAGAGCCTTAGCATTGTAAGAGGTCATAATAAGGCATTGCAAGATCAGTTGGTATCTCTTAAAGCTTCACAGGATGAGGCTATAAAGCAGAAAGAAGCCTCAACAAATGAACTCATACGCCTTCGTGAAGAATTAAAACAAATTAGAGATGAACGTGACCGCCAACAGGGACAAGTAAAGGCTTTAATGGGAGAAGTAGCAAAGTACAAAGAATATACAGGGAAATCGTTGGCACAATTGGATACTTTGATAATTAAAACAAATGCTCTTGAGGCGACTTGTTCTTCTCAAAAGGAGCAAATACTTCATCTGCAGCAGTTGTTGTTTGCTGAAAAGGAGAAGCTAGAGATGGCTGATTTATCAGCTTCGACAAGCAGAACAGTATTTGAAGAGCAAAGAAGACTTATAGGTGAATTACAAGATCAATTGGCTGATAAAGAAATTCAATTAGTTGAAGGAGAGAAGCTAAGGAAAAAGCTTCACAACACTATCCTGGAGCTAAAGGGAAATATTCGTGTGTTTTGCCGTGTGCGGCCTTTGCTACCAGAGGATGGTACAGGATCAGACATGGTTGTTTCTTACCCTAATTCAACAGAATCACTTGGACGGGGCATTGAATTGGTGCAAAGCGGGCAGCAGTACCCTTTTACATTTGACAAGGTGTTTGATCACGAAGCTTCTCAGCATGATGTTTTCATAGAGATATCACAGTTGGTACAAAGTGCACTTGATGGCTACAAGGTTTGCATCTTTGCTTATGGGCAGACAGGTTCTGGCAAAACCTATACAATGATGGGTAGGCCTGATGCCCCGGATCTGAAAGGGTTGATACCTCGTTCTCTAGAACAGATATTCCAGACTAGTCAGTCCCTGAAAGACCAAGGGTGGAAGTATAAAATGCAGGCATCCATATTGGAAATATATAACGAGACCATTCGAGATTTGTTATCTTCATATCGGTCAAGTGGGATGGATCAAGCACGAACAGACAACGGTATTGCTGGCAAGCAGTACACTATTAAACATGATGCAAATGGAAACACATTTGTTTCTGACCTGACCATTGTTGATGTGTGTAGTGTGAATGAGATTTCTTCCCTTCTGCAAAAGGCTTCACAAAGCAGGTCGGTGGGAAGAACACAGATGAATGAACAATCATCAAGAAGCCATTTTGTCTTTACTTTGCGTATATGTGGGATAAATGAGAATACTGGACAACAAGTGCAAGGTGTGCTAAACTTGATTGATCTGGCCGGAAGTGAAAGACTGTCAAGGAGTGGGGCAACTGGGGACCGATTAAAGGAAGCCCAGGCAATCAACAAAAGTCTCTCCTCTTTGAGTGATGTCATCTTTGCTTTGGCTAAGAAAGAGGATCATGTTCCGTTTAGAAATTCGAAACTAACATACCTTCTCCAGCCATGTCTTGGTGGGGACTCGAAAACATTAATGTTTGTCAACGTCTCACCTGATCAATCTTCAACCAGTGAGTCACTCTGCTCTCTCCGTTTTGCAGCCAGAGTCAATTCCTGTGAAATTGGAATTCCACAGCGGCAGACATCCACGTGA 2385 0.4155 MASRNQNNPPCSPSNKKGGRTEELFADKRGRIGAEKMEQRGGAVGKVRAPLSSVKVRSDTNAGSEIGSNEGMECSVVEFTKEDVEALLNEKRKKGDPFDNKKKQELMAAYIKRLKLCVRWFIKVENGYVQEKEKLQSELESLEKKCSYTEIEMKNKMGELNETISDLRRTITSLEERIVKEESDKLEAINCYKIEKEARSVAEKVRDEKSAELEKVLDQKSVAEQKAISNEDLYNRSQEYNMSLQQYNSRLQSDLDTSNEAHKRLEIEKATIVESLSIVRGHNKALQDQLVSLKASQDEAIKQKEASTNELIRLREELKQIRDERDRQQGQVKALMGEVAKYKEYTGKSLAQLDTLIIKTNALEATCSSQKEQILHLQQLLFAEKEKLEMADLSASTSRTVFEEQRRLIGELQDQLADKEIQLVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPEDGTGSDMVVSYPNSTESLGRGIELVQSGQQYPFTFDKVFDHEASQHDVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPDAPDLKGLIPRSLEQIFQTSQSLKDQGWKYKMQASILEIYNETIRDLLSSYRSSGMDQARTDNGIAGKQYTIKHDANGNTFVSDLTIVDVCSVNEISSLLQKASQSRSVGRTQMNEQSSRSHFVFTLRICGINENTGQQVQGVLNLIDLAGSERLSRSGATGDRLKEAQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNVSPDQSSTSESLCSLRFAARVNSCEIGIPQRQTST 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0570 794 Coils Coil 157 184 - -
Lal15g0570 794 Coils Coil 206 226 - -
Lal15g0570 794 Coils Coil 125 152 - -
Lal15g0570 794 MobiDBLite consensus disorder prediction 20 36 - -
Lal15g0570 794 ProSitePatterns Kinesin motor domain signature. 683 694 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lal15g0570 794 MobiDBLite consensus disorder prediction 1 15 - -
Lal15g0570 794 Coils Coil 402 429 - -
Lal15g0570 794 Gene3D Kinesin motor domain 387 785 IPR036961 -
Lal15g0570 794 SMART kinesin_4 441 791 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0570 794 Pfam Kinesin motor domain 449 782 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0570 794 PANTHER KINESIN-LIKE PROTEIN 3 793 - -
Lal15g0570 794 Coils Coil 283 338 - -
Lal15g0570 794 Coils Coil 248 268 - -
Lal15g0570 794 ProSiteProfiles Kinesin motor domain profile. 443 783 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0570 794 MobiDBLite consensus disorder prediction 1 46 - -
Lal15g0570 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 782 IPR027417 -
Lal15g0570 794 CDD KISc_C_terminal 441 785 - -
Lal15g0570 794 PANTHER KINESIN-LIKE PROTEIN KLP-3 3 793 - -
Lal15g0570 794 PRINTS Kinesin heavy chain signature 518 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0570 794 PRINTS Kinesin heavy chain signature 653 670 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0570 794 PRINTS Kinesin heavy chain signature 684 702 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lal15g0570 794 PRINTS Kinesin heavy chain signature 733 754 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0570 Lal-Chr15 3952515 3959318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0570 352 794 Calmodulin-binding Proteins AT5G65930 37.969 2.30e-82 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0570 K10405 - gmx:100818473 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0570 15 3952515 3959318 Lal5g1779 5 19748754 19754877 PCT
Lal15g0570 15 3952515 3959318 Lal11g0114 11 772903 778908 PCT
Lal5g1779 5 19748754 19754877 Lal15g0570 15 3952515 3959318 PCT
Lal11g0114 11 772903 778908 Lal15g0570 15 3952515 3959318 PCT