Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0557 ATGGAGAACTACCCGTACCCATCCTACCCAGATTCACATGAATCGTCGCCACGTTCGAGGGACACTGATTTTGAAAACCTGCCGCCATGGGACGATCAGCAACCGCCACCTAACTACAAAGCCAAATTCATGTGCAGCTACGGCGGCAAGATCCAACCTCGCACCCACGACAACCAACTCTCCTACGTCGGCGGCGAGACCAAGATCCTCGCCGTCGATCGCCACATCAAGTTCCCTTCCTTCATCTCCAAACTCTCCACTCTCTCCAACATCCCACCGGAACAACTCACACTAAAATACCAACTCCCAGACGAAGAACTCGACGCTCTGATTTCTGTAACTAACGACGATGATCTTGATCATTTGATGCACGAGTATGATCGTCTCTACCGTGCTTCTTCTAGACCCGCACGCATGCGATTATTTCTCTTTACTAATCCTACTCCTACAACTACTACTCCTCCTGTTACTACTTCCTCTTTCTCCTCCGAGTGTGATCGCTTCGTTGAAGCTCTTAATTCTGGTGGACTTTCAGTTCAGCCTGAACCGATTAAGCCGCAACCTCTTATGCATAGCAACGTTGATTTCCTCTTCGGATTGGACAAGGCGGTAGCTCCTCCTCCGCCGGTTGCGGCCGTGAAGTTCCACGATCAGGTGCCTGATCCTGTTGCGCCGGGTCCTGTTGAACGGAGAGTTGGATCTGATTCGAATGTGAACCCGATCGAGATTCAGAGGCAGTTACAGCAGATGCGAATTGCAGAGAGTGAGCAATATAGGAGAAGAAGCGAGGACGGTTTCTCTGGAGGTTTTTCCGGCGGTTCCGGAGATTATTACATGCAGAAGTTACCGGAGAAAGTTTCACCGTCGAATTCGCCTGTAAGCGTGCCGCATCATGCTGGTTTCTTTCCGGAGAGGCAGTTATCCGGCGGAGGTTTTCAGCCTACGGTGACGACGGCTCACGGAGGAGTGGACCAACACGTGTATATGGTCTCAGCGCCGGGAACGTACTATCATGCGCCACACGCGCCGGTGGTACGTCCGTCAGCGACCCAAGGGTATTACGCTGTGCAACGAATGGGTTCTGATGGTTACCGTGAACAGACGGTGTACGGCGGTGTGGCTCCTTCTAAAGCGGTGTTTTCGTCAGTAGCTCCATCGAGTTTGGCACCGGCACAGCCGGTTAGAGGTTCCACGTATGCAGAAGGATACGGTGTCATAAGGCCAGCTGGGGTGCCAGATAACAGTGCTGCTACGTACGCGCAGATGACTTATGATAGTGCGAGTGGAAGACAGGTTTACTATAATGCGCCGGGAGGGGTAATGCACGCGCCTCCGTTCCAAGGGGCGTCTCCGGCGATCAATGCGACGGATATGAGATCGGGTGGGGTTTCATCGGGGCAGGATGTTAAAGTGGTAAACAAGGTTAACCAGGGTCCTGTGTGA 1443 0.5274 MENYPYPSYPDSHESSPRSRDTDFENLPPWDDQQPPPNYKAKFMCSYGGKIQPRTHDNQLSYVGGETKILAVDRHIKFPSFISKLSTLSNIPPEQLTLKYQLPDEELDALISVTNDDDLDHLMHEYDRLYRASSRPARMRLFLFTNPTPTTTTPPVTTSSFSSECDRFVEALNSGGLSVQPEPIKPQPLMHSNVDFLFGLDKAVAPPPPVAAVKFHDQVPDPVAPGPVERRVGSDSNVNPIEIQRQLQQMRIAESEQYRRRSEDGFSGGFSGGSGDYYMQKLPEKVSPSNSPVSVPHHAGFFPERQLSGGGFQPTVTTAHGGVDQHVYMVSAPGTYYHAPHAPVVRPSATQGYYAVQRMGSDGYREQTVYGGVAPSKAVFSSVAPSSLAPAQPVRGSTYAEGYGVIRPAGVPDNSAATYAQMTYDSASGRQVYYNAPGGVMHAPPFQGASPAINATDMRSGGVSSGQDVKVVNKVNQGPV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0557 480 Gene3D - 61 146 - -
Lal15g0557 480 SUPERFAMILY CAD & PB1 domains 56 152 - -
Lal15g0557 480 PANTHER OS05G0427100 PROTEIN-RELATED 1 476 - -
Lal15g0557 480 SMART PB1_new 55 146 IPR000270 GO:0005515
Lal15g0557 480 Pfam PB1 domain 56 144 IPR000270 GO:0005515
Lal15g0557 480 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P (PB1) DOMAIN PROTEIN 1 476 - -
Lal15g0557 480 CDD PB1_UP2 44 144 - -
Lal15g0557 480 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0557 Lal-Chr15 3871955 3873397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0557 39 174 MAP Kinase Kinase Kinase AT5G57610 41.912 5.45e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0557 - - adu:107480527 586.26