Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0552 ATGGAAGCAGCATTTTGCTACTGTCAAAAAATGTACCTACTTGCATCATTTCATATAACACTAACACTAGCACTCTTGTTTGTTGTAATCTCTCATGGAGCTCCACTATCCTTTAACTATAAGCAATTTAGTAACACAGGAAATACCTTAAATTTAACAGCAGATGTGTATCAAGATAGAGAAGTTCTTCAACTCACTAGGAATGAAAAAGATAGTCTTGGTAGAGTCACATATTACAAACTGTTTCATCTTTGGGACATGAACTCAGAAAAGGTAACAGATTTCACTACCCATTTCTACTTTACTATGAACACACCAAATAAATCATATTGTGGTGATGGCATCACATTCTTTATGGCTAAGCCCAACTTTCCATTACCTGTTCCTAGAGATGGCAAGGGTATTGGTCTAGTGAGCAGTGTTCAATTGAGTGATTCAAGTTACACACATGAAAATCCATTTGTAGCAGTGGAATTTGATACCTCTAGCAATGAAGGGGACCCTGCATATGATCATGCTGGTATAGATGTTAATTCTATTACCCCTGCTTACACCACAGAATGGTTCACCAGCAAGGATGAAAGAGGCTATGATGCTTATATCAGTTACAATTCTAGTTCAAATAATTTAATTGTTACCTTCACAGGGTATAAGGATAATATCACAATTGAACAGCACTTATACTATGTGGTAAATCTGAGAGATGTGTTACCAGATTGGGTTGAATTTGGTTTCACTTCAGCAACTGTTTGGTTTTATGAGTATCATACTCTTAGCTCATGGTCCTTCAACTCTAGTTCGGACTTCGAAGAACACAAGGGTGAAAGCAAAACAAGGCTGATCATAGGGCTGAGTGTTGGTGCAGGTGTTTTAATTGGTGTTTTGGTGCTAACTTGGCTTGTGACAATGAAGCTGAGGAATAGAGGCATGGAGGATGTGTTGGATTCTGATCTTGCTATGGACAACGATTTCGAAAGAAACACAGGGCCTAGGAAATTTTCATATGAAGAACTTGCTAGAGCAACTAATAACTTTGCCAAGGAAGAGAAAATTGGAGAGGGAGGCTTTGGGGGAGGATCTAAACAAGGGGTGAAGGAGTATGCATCTGAAGTAAAGATCATAAGTCAGCTAAGGCATAAGAATTTGGTTCAACTCATTGGTTGGTGTCACCAGCAGAATGACCTGCTGCTGATTTATGAATTTGAAGAAAATGGAAGCTTAGATTCTTATCTGTTTAAAAGAAAAGGCCCACTAACATGGAATGTTAGATACAACATTGCTAGAGGCATGGCCTCAGCAGTGTTATATTTGCATGAAGAATGGAAGCAATGTGTGCTTCACAGAGACATAAAAGCTAGCAATGTTATGTTGGATTCTAATTTTAATGCAAAGCTTGGAGATTTTGGTTTGGCCAGACTAATAGACCATGAAATAGAATCCAAAACAACAGTTTTAGCAGGAACACTTGGATATATGCCTCCTGAAGCAGCTACCAGAGACAAGGCTAGTAGAGAGTCAGTCATATACGGTTTCGGAGTCGTTGCTTTGGAGATAGCTTGTGGAAGAAAGGCATTTGGTTCAAGTTTCATTGAAGAACAAAAGCACTTGGTGGAATGGATTTTGGAACTCTATGGTAAGGGTGATATCCTTAAAGCTGCTGATCCAAGTTTATGTAGAGACTTTGATGAGAATGAAATGAAGAGAATAATGATAGTTGGCCTTTGGTGTACTCACAGAGATTACCTTTTGAGGCCTACAATGAGGCAAGTTGTTCAAGTGCTTAATTTTGAAGCTCCACTTCCCATTCTCCCATCACAGATGCCTTCAACATCAAGCAATAGCTCGTTAACCGCGTCATCGCAATCAAGCACAACTTTTGATGTTATTTCCCCATCAGTTGCACTTCTACATGGACATACATGCTAA 1926 0.3899 MEAAFCYCQKMYLLASFHITLTLALLFVVISHGAPLSFNYKQFSNTGNTLNLTADVYQDREVLQLTRNEKDSLGRVTYYKLFHLWDMNSEKVTDFTTHFYFTMNTPNKSYCGDGITFFMAKPNFPLPVPRDGKGIGLVSSVQLSDSSYTHENPFVAVEFDTSSNEGDPAYDHAGIDVNSITPAYTTEWFTSKDERGYDAYISYNSSSNNLIVTFTGYKDNITIEQHLYYVVNLRDVLPDWVEFGFTSATVWFYEYHTLSSWSFNSSSDFEEHKGESKTRLIIGLSVGAGVLIGVLVLTWLVTMKLRNRGMEDVLDSDLAMDNDFERNTGPRKFSYEELARATNNFAKEEKIGEGGFGGGSKQGVKEYASEVKIISQLRHKNLVQLIGWCHQQNDLLLIYEFEENGSLDSYLFKRKGPLTWNVRYNIARGMASAVLYLHEEWKQCVLHRDIKASNVMLDSNFNAKLGDFGLARLIDHEIESKTTVLAGTLGYMPPEAATRDKASRESVIYGFGVVALEIACGRKAFGSSFIEEQKHLVEWILELYGKGDILKAADPSLCRDFDENEMKRIMIVGLWCTHRDYLLRPTMRQVVQVLNFEAPLPILPSQMPSTSSNSSLTASSQSSTTFDVISPSVALLHGHTC 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0552 641 SMART serkin_6 345 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0552 641 Gene3D Phosphorylase Kinase; domain 1 316 357 - -
Lal15g0552 641 PANTHER - 359 624 - -
Lal15g0552 641 PANTHER - 20 357 - -
Lal15g0552 641 ProSitePatterns Legume lectins beta-chain signature. 155 161 IPR019825 -
Lal15g0552 641 PANTHER LECTIN RECEPTOR KINASE 20 357 - -
Lal15g0552 641 PANTHER LECTIN RECEPTOR KINASE 359 624 - -
Lal15g0552 641 ProSiteProfiles Protein kinase domain profile. 280 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0552 641 Gene3D Transferase(Phosphotransferase) domain 1 404 614 - -
Lal15g0552 641 Pfam Legume lectin domain 36 276 IPR001220 GO:0030246
Lal15g0552 641 ProSitePatterns Legume lectins alpha-chain signature. 237 246 IPR000985 -
Lal15g0552 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Lal15g0552 641 Pfam Protein kinase domain 365 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0552 641 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 267 IPR013320 -
Lal15g0552 641 CDD lectin_legume_LecRK_Arcelin_ConA 36 258 IPR001220 GO:0030246
Lal15g0552 641 Gene3D - 34 281 - -
Lal15g0552 641 SUPERFAMILY Protein kinase-like (PK-like) 328 625 IPR011009 -
Lal15g0552 641 Gene3D Phosphorylase Kinase; domain 1 358 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0552 Lal-Chr15 3838394 3840379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0552 25 608 Receptor kinase-like Gene Family AT5G10530 43.065 1.22e-154 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal15g0552 Lectin_legB 8.6e-56 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0552 - - cam:101491058 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0552 15 3838394 3840379 Lal15g0552 15 3838394 3840379 ECH