Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0550 ATGCTTCCATATTCTTCTTTTTTTCCCTCTTCTTCTTCTCCTCGCTCTGTCTCTGCGATTCCATGCAATGCAACAGTGATGAAAAACAACACTCTGTATCCTATTCAATCTCTTTTACATTTTCATCATCAGTGGGTTTTTGTTGATTTCTTCTATTTCATGGGTTTCGATTTCCTTTTCAATTTTTTAACAGAGTTCGGTTGTGGCTATGTTCTTCTCGGTTGCTTCTCCACAGTCCTAAAATGTATCGGCATGTTTCTCATGTTCTTGTTCTGTTGCAAGGTTTTGCGTTCCATTTGGTATTTCAAGAGTTTGTTCCGATTTCAAAACGATTTTGGAGGCATACCCAAAATTTGTTTGTGTTTGAGAAACGCGGTTTGGCAAGTTTCTACATCAAAGGTTGAAACTTTGGAAAATGTGGGTGATGCTGACCCTTTGAAATTGAGTTCTTTTACTAAAAATGTTAGTGATGCGAGTTCCAGTGTTGCCGGGGAGAAAGGGAATGTTAATTCTGATGAGGGTTCTGAAGGGAAGGACGAGACTAATGAGAGTGAACGAGAGGTTGTTAATGAAGATGAAGTGTTCGACGTAATGATTCTGAGAAAGATGGTGAAGAGTGAGAGGCAAAAAGCTGATGCAGCATTTGCAGAACTTGAGAAGGAAAGAACAGCAACTGCTTCCTCGGCGGAGGAAGCAATGGCGATGATTTTGCGGCTTCAGAGGGAGAAAAGCTCGGCGGAAATTCAAGCCAGTCAGTTCCAGAGAATGGCTGAGCATAAGATGGGTTATGATCAGGATGTGATTGAGTCATTGGAGTGGATGATCACACAGCACGAGTCTCAGAGGAGTTACTTGGAAGAGCAGATAGAGATTTATAGGAAAGAACTGAAGCAGCATATGAGTGATGATGAATTAAAGAAACTTGAATTTGATAATTATAGGGATGGTTCACTAGTTAGTTCTTCTGAAATTGAATCACAGGCGTTGTAA 990 0.4051 MLPYSSFFPSSSSPRSVSAIPCNATVMKNNTLYPIQSLLHFHHQWVFVDFFYFMGFDFLFNFLTEFGCGYVLLGCFSTVLKCIGMFLMFLFCCKVLRSIWYFKSLFRFQNDFGGIPKICLCLRNAVWQVSTSKVETLENVGDADPLKLSSFTKNVSDASSSVAGEKGNVNSDEGSEGKDETNESEREVVNEDEVFDVMILRKMVKSERQKADAAFAELEKERTATASSAEEAMAMILRLQREKSSAEIQASQFQRMAEHKMGYDQDVIESLEWMITQHESQRSYLEEQIEIYRKELKQHMSDDELKKLEFDNYRDGSLVSSSEIESQAL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0550 329 MobiDBLite consensus disorder prediction 171 185 - -
Lal15g0550 329 Coils Coil 275 302 - -
Lal15g0550 329 Pfam Zein-binding 200 289 IPR007656 -
Lal15g0550 329 PANTHER PROTEIN FLOURY 1-LIKE 46 309 IPR040284 -
Lal15g0550 329 Coils Coil 229 256 - -
Lal15g0550 329 Coils Coil 201 221 - -
Lal15g0550 329 MobiDBLite consensus disorder prediction 158 188 - -
Lal15g0550 329 PANTHER BNAANNG28530D PROTEIN 46 309 - -
Lal15g0550 329 ProSiteProfiles GTD-binding domain profile. 195 293 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0550 Lal-Chr15 3825872 3826983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0550 - - lja:Lj4g3v0388260.1 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0628 16 4026631 4027467 Lal15g0550 15 3825872 3826983 LSH
Lal15g0550 15 3825872 3826983 Lal3g0044 3 273753 277463 PCT
Lal15g0550 15 3825872 3826983 Lal11g0101 11 655898 657770 PCT
Lal3g0044 3 273753 277463 Lal15g0550 15 3825872 3826983 PCT
Lal11g0101 11 655898 657770 Lal15g0550 15 3825872 3826983 PCT