Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0548 ATGTTACAGCTATCTATTCAACGAGTGAAGAAGTTCAATTCTTTGATGCCTCAGATCTATGCTTTGGGAACTTCCCATTTCTCAACAGCTACGGACCCATCTTCCATTAAGCGTAATCCTCTGAGAGTTCCAAATCTTATTGGAGGGAGTTTTGTTGACTCAAAAGCAGCATCTTTCATCGATGTTCTAAACCCTGCAACCCAAGAAGTTGTTTCACAAGTTCCCTTGACTACAGATGATGAATTTAAATCTGCTGTATCTTCAGCAAAAAAGGCATTCTCATCATGGCGCAACACTCCAATTACGACACGCCAACGTGTTATGTTGAAGTTCCAGGAGCTTATACGCAGAGATATGGATAAACTTGCCCTGAGCGTGACCACAGAACAAGGAAAGACATTAAAGGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAAATGGGAGAGTATGTTTCTAATGTATCACATGGAATTGATACTTTCAGCATTAGAGAACCACTTGGTGTTTGTGCTGGTATTTGTCCTTTCAATTTTCCTGCCATGATTCCCTTATGGATGTTCCCAGTGGCTGTTACTTGTGGTAACACCTTTATTCTAAAGCCATCAGAGAAAGATCCTGGTTGTTCCCTATTGCTTGCAGAATTGGCATTGGAGGCTGGTTTACCTGAAGGTGTCTTAAATATTGTTCACGGAACTCATGATATTGTGAATGCTATCTGTGATGATGACGACATCAAAGCCGTATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCATCAGCTAAAGGAAAACGTGTTCAGTCTAATATGGGGGCCAAAAATCATGCAATTGTCATGCCAGATGCAAATGTTGATGCTACTCTAAATGCTTTAATTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGCACAGTTGTTTTTGTTGGAGGCTCACAGTCATGGGAAAACAAAATTATTGAGCGTGCCAAAGCTCTTAAAGTTAATGCTGGAATTGAACCTGATACAGACCTTGGTCCGGTCATCAGCAAACAGGCAAAAGAGCGAATACATAGATTAGTTCAATCTGGTGTTGAAGATGGTGCCAGACTACTGCTTGACGGAAGAAATATAGTGGTCTCAGGATATGAGTCTGGCAATTTTGTTGGCCCAACTATTTTATCAAATGTCACTGACAGCATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCTTGGAGGCTGATAGCTTGGAAGAGGCCGTAAACATTATCAACAAAAACAAGTATGGAAATGGTGCTTCTATATTTACTGCATCTGGTGTTTCTGCAAGGAAATTTCAGACTGAGATCGAGGCTGGACAGGTTGGCATCAACGTTCCCATTCCAGTTCCCTTACCCTTTTTCTCATTTACTGGCAACAAGGCATCATTCGCAGGCGATCTCAATTTTTACGGCAAGGCAGGGGTTAACTTTTTTACACAGATCAAAACAGTAACCCAGCAATGGAAGGATTCAGCTGGTGACAGCAAGATTAACATGGCAATGCCAACTTCCCAAAAATCTTGA 1617 0.4187 MLQLSIQRVKKFNSLMPQIYALGTSHFSTATDPSSIKRNPLRVPNLIGGSFVDSKAASFIDVLNPATQEVVSQVPLTTDDEFKSAVSSAKKAFSSWRNTPITTRQRVMLKFQELIRRDMDKLALSVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTFSIREPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGCSLLLAELALEAGLPEGVLNIVHGTHDIVNAICDDDDIKAVSFVGSNVAGMHIYSRASAKGKRVQSNMGAKNHAIVMPDANVDATLNALIAAGFGAAGQRCMALSTVVFVGGSQSWENKIIERAKALKVNAGIEPDTDLGPVISKQAKERIHRLVQSGVEDGARLLLDGRNIVVSGYESGNFVGPTILSNVTDSMECYKEEIFGPVLLFLEADSLEEAVNIINKNKYGNGASIFTASGVSARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSAGDSKINMAMPTSQKS 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0548 538 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 24 538 IPR010061 GO:0004491
Lal15g0548 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 47 496 IPR016162 GO:0016491
Lal15g0548 538 Pfam Aldehyde dehydrogenase family 51 515 IPR015590 GO:0016491
Lal15g0548 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 288 488 IPR016163 GO:0016620
Lal15g0548 538 SUPERFAMILY ALDH-like 39 520 IPR016161 GO:0016491
Lal15g0548 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 313 324 IPR016160 GO:0016491
Lal15g0548 538 CDD ALDH_F6_MMSDH 43 519 IPR010061 GO:0004491
Lal15g0548 538 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 24 538 - -
Lal15g0548 538 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 45 519 IPR010061 GO:0004491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0548 Lal-Chr15 3810022 3822577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0548 15 503 Aldehyde Dehydrogenase Gene Family AT2G14170 79.959 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0548 K00140 - gmx:100791508 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0548 15 3810022 3822577 Lal15g0548 15 3810022 3822577 ECH