Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0505 ATGTCTTTATCCTGCTCCGATGTCTTCTCTGACTCTAACCTCCTCTGCAGCGAGGACACATCTGGAATCCTCTCCGGAGATTCGTCGGAATTCTCATCCTCCGAGATAGAATCGTTGCCGCCGACGATGTCATTATCGGAGGAGGAAGAGTCCATAGCCGGATTCATCGAAGACGAACGCAACTTTGTTCCTGGATTCGATTACCTTTCGAGGTTACAGTCTTCATCGTTCGACGCATCCGCCAGAAAAGAATCAGTTGAATGGATTCTCAAGGTGCAGGCTTATTTCGGTTTTCAACCGTTGACGGCTTATCTCTCCGTCAATTACATGGATCGGTTCTTGAACTCTCGGCGGCAGTTGCCGCAAACAAATGGGTGGCAACTGCAACTCCTGTCTGTTGCATGCTTGTCTTTAGCGGCAAAGATGGAGGAGCCTATGGTTCCGTCTCTCTTGAATCTCCAGGTAGAAAGTCCCAAATATATATTTGAACCCAAAACAATTCGAAGGATGGAGCTGCTTGTTCTGGGTGTTCTTGATTGGAGGCTAAGATCAATCACCCCGTTTAGCTTCCTCGGATTCTTCTCATGCAAATTTGATCCAACCGGAATTTTTACTGGGTTCCTCATTTCACGGGCTACACAAATAATCTTATCTAATGTTCAAGAGGCTAGTTTTCTTGCATACTGGCCATCATGCATTGCTGTTGCGGCCTTACTATGTGCAGCTAACGAAATTCCTAATTGGTCACTCGTTAAACCAGAACATGCCGAGTCATGGTGCGAGGGGTTAAGAAAAGAGAAAATTATTGGGTGTTACCAATTAATACAAGAACTTGTTATTGACAATAACAAGAGGAAGCTCCCTGAAGTGTTACCACAACTGCGATTGACAAATCAGTACCCAATGAGGTTAAGTGTCTCGTCATTCTCATTATCTTCTTCCTCTTCTACTTCCTTCTCGTTGTCTTACAAAAGGAGGAGAATAAATAGAAACTGTTTGTGGCTTGATGGTGACAAAGAAAACTCCCAGTGA 1032 0.4448 MSLSCSDVFSDSNLLCSEDTSGILSGDSSEFSSSEIESLPPTMSLSEEEESIAGFIEDERNFVPGFDYLSRLQSSSFDASARKESVEWILKVQAYFGFQPLTAYLSVNYMDRFLNSRRQLPQTNGWQLQLLSVACLSLAAKMEEPMVPSLLNLQVESPKYIFEPKTIRRMELLVLGVLDWRLRSITPFSFLGFFSCKFDPTGIFTGFLISRATQIILSNVQEASFLAYWPSCIAVAALLCAANEIPNWSLVKPEHAESWCEGLRKEKIIGCYQLIQELVIDNNKRKLPEVLPQLRLTNQYPMRLSVSSFSLSSSSSTSFSLSYKRRRINRNCLWLDGDKENSQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0505 343 Gene3D - 56 246 - -
Lal15g0505 343 PANTHER CYCLINS 1 331 IPR039361 -
Lal15g0505 343 SMART cyclin_7 87 176 IPR013763 -
Lal15g0505 343 CDD CYCLIN 82 175 IPR013763 -
Lal15g0505 343 Pfam Cyclin, C-terminal domain 185 291 IPR004367 -
Lal15g0505 343 SUPERFAMILY Cyclin-like 43 182 IPR036915 -
Lal15g0505 343 Gene3D - 65 183 - -
Lal15g0505 343 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 331 - -
Lal15g0505 343 SMART Cyclin_C_2 185 312 IPR004367 -
Lal15g0505 343 Pfam Cyclin, N-terminal domain 54 182 IPR006671 -
Lal15g0505 343 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0505 Lal-Chr15 3495550 3500298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0505 1 297 Core Cell Cycle Gene Families AT1G70210 62.000 2.55e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0505 K18810 - gmx:100775224 481.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0505 15 3495550 3500298 Lal15g0505 15 3495550 3500298 ECH
Lal16g0563 16 3620986 3624604 Lal15g0505 15 3495550 3500298 LSH
Lal15g0505 15 3495550 3500298 Lal23g1041 23 12175499 12181278 LSH