Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0503 GAGAAGAAGAAGAAGAAAGCGGCAATGGTGTTAACGAGTTCGAAACCAGCAACGAAGGTTTTATGGGGTGAACTTGAAGAAGATGATGGAGAAGATCTGGATTTTCTGTTACCACCTAAGCATATAATTGGTCCTGACCAGAACGGAATAAAGAAGGTGATAGAATACATGTTCAATGATGAAGGGAATAAGGTTAAGATTACTACCACCATTCGAATACGCAAACTCGCCAATGCACGTCTCAGTAAACGTGCCATTGAGAGGCGTTCTTGGCTTAAGTTTGGTGATGCCGTTAATGAAGATGTAGGTAGTAGACTCACTATGGTGTCCACTGAAGAGATTGTTCTTGAACGACCCAAACCTCTTGGTTCTAAAGCTGAGGAACCAAAGGCTTCTGGAGATCCATTAGCCCAATTTCAGAAAGGTGCTGTTCTTATGGTCTGTAGGACTTGTGGGAAGAAGGGTGACCACTGGACTTCAAAATGTCCATACAAGGATCTTTCTGCACCATCTGAGGGATTTGTTGACAAGCCTCCAACATCCGATGCTGCAGCTGCTGCTCCTGGTTCAACAAAGGGAGCATATGTGCCTCCTGGAATGAGAGCCGGTGCAGAGAGGACTGGGTCGGATATGAGGCGTAGGAATGATGAAAATTCTGTAAGGGTCACCAACCTCTCAGAGGACACTAGAGAGCCTGATTTGCTTGAACTCTTCCGTCCTTTTGGCGCTGTGAGCAGAGTCTATGTTGCTATTGATCAAAAAACTGGTACGAGCAGAGGGTTTGGCTTTGTTAACTTTGTTAACAGGGAAGAAGCACAGAGAGCTATTAACAAACTAAATGGATATGGCTATGACAGTCTCATCCTCAGAGTTGAATGGGCCACCCCAAGGACAACCTAG 900 0.4522 EKKKKKAAMVLTSSKPATKVLWGELEEDDGEDLDFLLPPKHIIGPDQNGIKKVIEYMFNDEGNKVKITTTIRIRKLANARLSKRAIERRSWLKFGDAVNEDVGSRLTMVSTEEIVLERPKPLGSKAEEPKASGDPLAQFQKGAVLMVCRTCGKKGDHWTSKCPYKDLSAPSEGFVDKPPTSDAAAAAPGSTKGAYVPPGMRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGTSRGFGFVNFVNREEAQRAINKLNGYGYDSLILRVEWATPRTT 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0503 299 Pfam Eukaryotic translation initiation factor 3 subunit G 43 167 IPR024675 -
Lal15g0503 299 SMART rrm1_1 219 292 IPR000504 GO:0003723
Lal15g0503 299 CDD eIF3G 48 166 IPR024675 -
Lal15g0503 299 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 220 285 IPR000504 GO:0003723
Lal15g0503 299 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 218 296 IPR000504 GO:0003723
Lal15g0503 299 SUPERFAMILY RNA-binding domain, RBD 209 298 IPR035979 GO:0003676
Lal15g0503 299 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 17 299 - -
Lal15g0503 299 MobiDBLite consensus disorder prediction 173 218 - -
Lal15g0503 299 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 17 299 - -
Lal15g0503 299 Gene3D - 180 299 IPR012677 -
Lal15g0503 299 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 19 298 IPR017334 GO:0003743|GO:0005737|GO:0005852
Lal15g0503 299 PIRSF Transl_init_eIF-3_RNA-bind 11 299 IPR017334 GO:0003743|GO:0005737|GO:0005852
Lal15g0503 299 CDD RRM_eIF3G_like 219 294 IPR034240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0503 Lal-Chr15 3476944 3479191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0503 9 299 Eukaryotic Initiation Factors Gene Family AT3G11400 67.802 1.33e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0503 K03248 - gmx:100818725 489.96