Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0493 ATGGATCTGGAAGGTGGGTCTCGTCGAAATTCTGCAAAGAGAGAATCATGGAAAACAGTGCTAATTCTGGCATATCAGAGTCTTGGAGTTGTGTATGGAGACTTGAGCACTTCACCTTTATACGTGTTCAGGAACATTTTTACTGAAGATATTCATCACACAGAGACCAATGAAGAGATCTATGGTGTGTTGTCTTTGGTGTTTTGGACATTCACTTTGGTCCCTTTGTTGAAATATGTGTTGATAGTGCTTAAAGCTGATGATAATGGAGAAGGAGGCACATTTGCTTTATACTCTTTGCTGTGTAGACATGCCAGAGTTAGTTCACTGCCAAATTGCCAGGTGGTAGATGAGGAGATTTCTGATTACAACAAAAATGGTGTTGCCTCTGAGAGAAGCATTGCATCTAGGTTAAAGTCTACTTTGGAGAAGCACAAGGTTCTTCAGAGGATTTTGCTTGTTCTGGCTTTGGTTGGAGCTTCTATGGTGATTGGTGATGGTGTCCTCACACCTGCTATTTCTGTTTTCTCGGCTGTGTCGGGATTGGAGCTTTCAGTGTCCAAGGAGCATCACGGATATATAGAAGTTCCATCTGCGTGCATCATATTGATAGGCTTGTTCGCCCTTCAACATTATGGTACACACAGGGTCGGCTTCTTGTTTGCTCCTATAGTCATCACATGGCTTTTCTGTATCGGTGCCATTGGTGTTTATAATATATTCCACTGGAATCCTCATATATACAAAGCACTCTCTCCCTATTATATTTTCCTATTTTTTAGGACAAATCGGAATGGAGGTTGGATGGCCCTAGGTGGAGTTTTTCTGTGCGTAACAGGATCAGAAGCCATGTTTGCTGATCTTGGGCACTTTTCACAATTATCAATCAAGATTGCTTTCACCTCTGTGGTATATCCATCTCTAGTTCTTGCATATATGGGGCAAGCTGCTTATCTATCTAGACATCATCATATTCAGCATGAGCATCACTTTAGCTTTTATGTGTCTGTACCAGAGAAATTGAGATTGCCTGTCCTTGTGATAGCAATACTTGCTGCAGTTGTGGGAAGCCAAGCCATCATCACCGGAACTTTCTCAATTATCAAGCAATGCACTGCATTAAGTTGCTTCCCTAGAGTTAAAGTGGTTCATACATCATCCAAAATTCATGGGCAAATATATATCCCCGAGATCAATTGGCTATTGATGCTCTTGTGTTTGGCTGTAACTATTGGTTTTAGAGACACAAAGCGTATGGGCAATGCCGCAGGTTTAGCAATTATCACAGTGATGCTGGTCACAACTTGTTTGATGTCACTGATTATTGTACTATGCTGGCACCAGCATGTTCTCCTTGCACTTGGTTTTGTTTTCATATTTGGCACCATTGAGGCTATCTTCTTCTCAGCTTCTCTTATCAAGTTCCTAGAAGGAGCATGGTGCCCAGTTGCATTAGCATTTGTGTTTCTTACTATCATGGCTGTTTGGCACTATGGCACACTAAAAAAGTATGAATTTGATGTTCAAAACAAGGTTTCCATCAACTGGCTACTCAGCCTAGGTGCCAGCATAGGAATTGTACGAGTCCGTGGCATTGGCCTTATACATACTGAGCTAGTTTCTGGAATTCCTGCAATCTTCTCCCGCTTTGTAACCAACTTGCCAGCCTTCCACCAGGTCCTAGTTTTTCTCTGCATCAAACATGTGCCTGTTCCACGTGTTAGACCTGAGGAAAGGTTTCTAGTAGGCCGTATAGGACCAAGAGATTTCAGAATATACCGGTGCATAGTGAGATATGGATACCATGATTTCCATAAGGATGACATTGAGTTTGAGAATGATCTTGTATGCAGCATAGCAGAGTTCATACGTTCGGGGAGCACTGAAAGCTCTTCAAACAATGACTTTGAGAAGGATGACAAAATGACAGTTGTTGGAACATGTTCTACTCATTCTATTTGGATGAGCGAGGATAATGTGGACGACATAGATAATATAGACGCAGCCGGGCCTTCAGAGCTCAAGAAGATAAAGTCATCGGTCAGGACTTCAGAGCTCATGGAGACAAAGTCACCGACCGAGACCTCAGAGCTCGCAGAGATAAAGTCACCGGTAAAATCACCTCAGGTGATCAGAAAAAGAGTAAGGTTTTTTGTACCGGAGAGTCCAAAGATTGACAGTGCTGCAACAAGAGAGTTGGAAGAGCTAACAGAAGCAAGGGAGTATGGGATGGCTTACATTATAGGACAGTCATACATGAGAGCTAAACCAGGTTGTAGCATGTTGAAGAAATTGGTTATTAATTATGTATATGAATTCCTAAGGAAGAATAGCAGGGCACCCTCTTATGTAAATGTAGCTCATGCATCATCTTTGGAAGTTGGGATGATGTACCAAGTTTAA 2403 0.4203 MDLEGGSRRNSAKRESWKTVLILAYQSLGVVYGDLSTSPLYVFRNIFTEDIHHTETNEEIYGVLSLVFWTFTLVPLLKYVLIVLKADDNGEGGTFALYSLLCRHARVSSLPNCQVVDEEISDYNKNGVASERSIASRLKSTLEKHKVLQRILLVLALVGASMVIGDGVLTPAISVFSAVSGLELSVSKEHHGYIEVPSACIILIGLFALQHYGTHRVGFLFAPIVITWLFCIGAIGVYNIFHWNPHIYKALSPYYIFLFFRTNRNGGWMALGGVFLCVTGSEAMFADLGHFSQLSIKIAFTSVVYPSLVLAYMGQAAYLSRHHHIQHEHHFSFYVSVPEKLRLPVLVIAILAAVVGSQAIITGTFSIIKQCTALSCFPRVKVVHTSSKIHGQIYIPEINWLLMLLCLAVTIGFRDTKRMGNAAGLAIITVMLVTTCLMSLIIVLCWHQHVLLALGFVFIFGTIEAIFFSASLIKFLEGAWCPVALAFVFLTIMAVWHYGTLKKYEFDVQNKVSINWLLSLGASIGIVRVRGIGLIHTELVSGIPAIFSRFVTNLPAFHQVLVFLCIKHVPVPRVRPEERFLVGRIGPRDFRIYRCIVRYGYHDFHKDDIEFENDLVCSIAEFIRSGSTESSSNNDFEKDDKMTVVGTCSTHSIWMSEDNVDDIDNIDAAGPSELKKIKSSVRTSELMETKSPTETSELAEIKSPVKSPQVIRKRVRFFVPESPKIDSAATRELEELTEAREYGMAYIIGQSYMRAKPGCSMLKKLVINYVYEFLRKNSRAPSYVNVAHASSLEVGMMYQV 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0493 800 PANTHER POTASSIUM TRANSPORTER 6 1 681 - -
Lal15g0493 800 PANTHER POTASSIUM TRANSPORTER 6 691 800 - -
Lal15g0493 800 TIGRFAM kup: potassium uptake protein 23 800 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal15g0493 800 Pfam K+ potassium transporter 25 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal15g0493 800 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 691 800 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal15g0493 800 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 681 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0493 Lal-Chr15 3396644 3401513 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0493 1 800 Inorganic Solute Cotransporters AT1G70300 69.641 0.0 1155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0493 K03549 - gmx:100793141 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0493 15 3396644 3401513 Lal15g0493 15 3396644 3401513 ECH
Lal16g0548 16 3507766 3519991 Lal15g0493 15 3396644 3401513 LSH
Lal22g0792 22 5811980 5819166 Lal15g0493 15 3396644 3401513 PCT
Lal6g0884 6 6091241 6099524 Lal15g0493 15 3396644 3401513 PCT