Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0490 ATGGCTTCTTCATTAAGGATTTCAAAGTTGCTATCTCTTTCTTTTCTTTCTGCTTCCACCACTTCTTTGTCTTCTAGAGGTTGCAGTGGTTACCTTGGTAGAGGGTTCAGTAAATATAGCACTAATGCTGCCATTGAAGAACCAATTAAACCACCGGTTCAAGTAGAACACACCCAGATCTTAATCAATGGACAATTTGTTGATTCTGTTTCTGGCAAAACATTTCCGACGTTGGATCCTAGGACAGGGGAAGTGATTTCTCATGTTGCGGAGGGTGACCGTGAAGATGTTAATTTAGCAGTTGCAGCTGCGCGCAAAGCATTCGACCAAGGCCCTTGGCCTAAGATGACAGCATATGAAAGACAAAGGATATTGCTGCGCGCCGCTGATCTGTTAGAAAAGCACAATGATGAGCTTGCTGCACTTGAGAGTTGGGATAGTGGGAAGCCATATGAGCAATCTGCTAAAGTTGAAGTTCCAATGCTGGCTCACCTATTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTAATGGGCCATATCATGTACAAACACTGCATGAACCTATTGGTGTTGCTGGTCAAATCATTCCATGGAACTTCCCACTTCTGATGTTTGGCTGGAAGGTTGCGCCAGCATTGGCCTGTGGCAACACTATTGTTCTGAAAACAGCTCAGCAGACACCATTATCTGCTTTATATGCAGCAAAGTTACTTCATGAGGCTGGTCTTCCACCTGGTGTTTTAAATGTAGTATCTGGCTTTGGTCCAACTGCTGGTGCTGCTATTGCTACTCACATGGATGTGGATAAGATTGCTTTTACTGGTTCAACTGCTACCGGAAGAATAGTTCTTGAACTGGCAGCAAGAAGTAACCTTAAGACTGTAACTTTGGAGCTTGGTGGCAAATCCCCTTTTATTGTATGTGAAGATGCTGATATAGACCAGGCTGTTGAGCTTGCTCACTTTGCAATATTCTTCAATCAGGGGCAATGCTGCTGTGCTGGATCTCGAACATTTGTTCACGAAAGCGTGTATGATGAGTTTGTTGAAAAGTCTAAGGCACGTGCTTTGAAACGTGTTGTTGGTGATCCATTCAAGGGAGGAGTAGAGCAAGGTCCTCAGGTTGATTCGGATCAATTCAAGAAAATTCTCAAGTATATCAGATACGGTGTTGAAAGTGGAGCAATCCTTGAAGCTGGAGGACAAAGACTTGGAGACAAGGGCTTCTATATTCAGCCTACTGTCTTCTCAAATGTTCAGGATGACATGCTGATTGCAAAGGAAGAGATTTTTGGCCCGGTGCAATCCATACTAAAATTCAAGGACCTTGATGAGGTGATTAGAAGAGCAAATAACTCACCCTATGGTCTAGCAGCTGGGGTGTTCACAAAGAACATAGACACTGCCAACACTTTGACTCGTGCATTGAGAGTTGGGTCAGTATTTGTGAACTGCTATGATATATTTGATGCAGGTGTTCCCTTTGGAGGATATAAAATGAGTGGACATGGAAGAGAAAAAGGAGAATATGGTCTTAGGAACTACTTGCAAGTCAAGGCTGTTGTTACTCCTTTGATCAATCCAGCTTGGCTTTGA 1617 0.4341 MASSLRISKLLSLSFLSASTTSLSSRGCSGYLGRGFSKYSTNAAIEEPIKPPVQVEHTQILINGQFVDSVSGKTFPTLDPRTGEVISHVAEGDREDVNLAVAAARKAFDQGPWPKMTAYERQRILLRAADLLEKHNDELAALESWDSGKPYEQSAKVEVPMLAHLFRYYAGWADKIHGLTVPANGPYHVQTLHEPIGVAGQIIPWNFPLLMFGWKVAPALACGNTIVLKTAQQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAAIATHMDVDKIAFTGSTATGRIVLELAARSNLKTVTLELGGKSPFIVCEDADIDQAVELAHFAIFFNQGQCCCAGSRTFVHESVYDEFVEKSKARALKRVVGDPFKGGVEQGPQVDSDQFKKILKYIRYGVESGAILEAGGQRLGDKGFYIQPTVFSNVQDDMLIAKEEIFGPVQSILKFKDLDEVIRRANNSPYGLAAGVFTKNIDTANTLTRALRVGSVFVNCYDIFDAGVPFGGYKMSGHGREKGEYGLRNYLQVKAVVTPLINPAWL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0490 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 24 538 - -
Lal15g0490 538 SUPERFAMILY ALDH-like 54 533 IPR016161 GO:0016491
Lal15g0490 538 CDD ALDH_F2BC 55 530 - -
Lal15g0490 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Lal15g0490 538 Pfam Aldehyde dehydrogenase family 66 528 IPR015590 GO:0016491
Lal15g0490 538 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 332 343 IPR016160 GO:0016491
Lal15g0490 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 72 528 IPR016162 GO:0016491
Lal15g0490 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 499 IPR016163 GO:0016620
Lal15g0490 538 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 24 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0490 Lal-Chr15 3358206 3362646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0490 6 538 Aldehyde Dehydrogenase Gene Family AT3G48000 74.532 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0490 K00128 - gmx:100786773 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0490 15 3358206 3362646 Lal15g0490 15 3358206 3362646 ECH