Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0476 ATGGAACTTACTAGTTTGATTTTCTGGCTACTGTGTTTGCTTCTTCTGTTGCTGATGGAGGTGTCTTCTGCTTCTCTTTCTCCTTCTGGCATAAACTATGAAGTTGTAGCTTTGATGGGCATAAAGACTGACTTGATTGACCCACACAATGTCCTAGAAAATTGGGATATTAATTCTGTTGATCCATGTAGCTGGAGGATGATTACTTGTACTCCTGATGGCTATGTTTCTGCATTGGGATTGCCTAGTCAGAACTTGTCTGGTAAACTATCTCCTTGGATTGGAAACCTTACTAACTTACAATCTGTGTTGCTTCAGAATAATGACATTTCTGGTCATATTCCTGCTGCAATAGGAAGCTTGGAAAAGCTTCAGACACTTGATCTATCCAATAATGCGTTTACTGGTGAGATACCGAGTTCTTTTGGAGGCCTCAAGAACCTGAATTATTTGCGGTTGAATAATAACAGCTTTACAGGAACCTGCCCTCAGTCTCTTAGCAACATTGAAGGTCTAACCCTTGTGGACCTCTCTTACAATAATCTGAGTGGCTCCTTGCCAAGAATATCAGCAAGAACATTAAAAATTGTGGGTAACCCATTAATTTGTGGCCCAAAAGAAAACAATTGTTCTACTGTCTTACCAGAGCCACTTTCCTTCCCACCAGACACACTAAGAGAGCAACCAGACTCTGGTAAAAAAAGCTATCATGTAGCAGTTGCTTTTGGTGCAAGCTTTGGTGCTGCTTTTGTTGTTGTGGTTATTGTTGCGTTTCTTTTTTGGTGGCGGTATAGACACAACCAGCAGATATTTTTCGATGTTAATGTAAAAAATTGTAACTCGGCAGAGCAATACGACCCAGAGGTGCGCCTTGGTCATTTGAAAAGGTTTTCATTCAAAGAGCTTCGAGCTGCAACAGACCATTTCAACTCAAAGAACATTTTAGGAAGAGGTGGCTTTGGAATAGTTTACAAGGCATCCTTGAGTGATGGATCCATTGTGGCTGTTAAAAGGTTGAAGGATTATAATGCAGCTGCTGGTGAGATCCAAATTCAGACAGAAGTCGAGACAATAAGTTTGGCTGTTCACCGGAATCTTCTGAGGCTTTGTGGGTTTTGCATTACTCAGAATGAAAGACTCCTTGTTTATCCATACATGTCTAATGGCAGTGTCGCCTCTAGATTAAAAGATCATATTCATGGCCGGCCAGCTTTAGATTGGACAAGGCGGAAGAGAATAGCCTTAGGTACAGCAAGAGGGTTGGTGTATTTGCATGAGCAATGTGACCCTAAAATTATTCACCGTGATGTCAAAGCGGCAAACATATTGCTAGATGAAGACTTTGAAGCAGTTGTTGGTGATTTTGGTTTAGCGAAGCTACTGGATCACAGAGATTCCCATGTGACCACTGCTGTGCGTGGTACCGTTGGGCACATTGCTCCTGAGTACCTATCCACAGGCCAATCATCAGAAAAGACCGATGTATTTGGCTTCGGAATCTTGCTGCTTGAGCTGATCACAGGTCACAAGGCTCTAGATTTCGGACGAGCAGCAAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTCCACCAGGATGGAAGATTGAGTCAAATGGCAGATAAAGATCTAAAGGGCGACTTTGTCATGGCCGAGTTGGAAGAAATGGTTCAAGTTGCACTCTTGTGTACACAATTTAATCCTTCACACCGACCAAAGATGTCAGAAGTATTAAAGATGTTGGAAGGGGATGGCTTAGCCGAGAGATGGGAGGCCTCACAGAGGATTGAGACACCAAGGTTCCGGTCGTGTGAAAATCCGCCTCAAAGGTACTCAGATTATATAGAGGAATCTTCACTCATAGTAGAAGCTATGGAGCTCTCTGGCCCTAGGTGA 1899 0.4281 MELTSLIFWLLCLLLLLLMEVSSASLSPSGINYEVVALMGIKTDLIDPHNVLENWDINSVDPCSWRMITCTPDGYVSALGLPSQNLSGKLSPWIGNLTNLQSVLLQNNDISGHIPAAIGSLEKLQTLDLSNNAFTGEIPSSFGGLKNLNYLRLNNNSFTGTCPQSLSNIEGLTLVDLSYNNLSGSLPRISARTLKIVGNPLICGPKENNCSTVLPEPLSFPPDTLREQPDSGKKSYHVAVAFGASFGAAFVVVVIVAFLFWWRYRHNQQIFFDVNVKNCNSAEQYDPEVRLGHLKRFSFKELRAATDHFNSKNILGRGGFGIVYKASLSDGSIVAVKRLKDYNAAAGEIQIQTEVETISLAVHRNLLRLCGFCITQNERLLVYPYMSNGSVASRLKDHIHGRPALDWTRRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQDGRLSQMADKDLKGDFVMAELEEMVQVALLCTQFNPSHRPKMSEVLKMLEGDGLAERWEASQRIETPRFRSCENPPQRYSDYIEESSLIVEAMELSGPR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0476 632 Gene3D Phosphorylase Kinase; domain 1 279 385 - -
Lal15g0476 632 Gene3D Transferase(Phosphotransferase) domain 1 386 601 - -
Lal15g0476 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Lal15g0476 632 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Lal15g0476 632 SUPERFAMILY Protein kinase-like (PK-like) 286 583 IPR011009 -
Lal15g0476 632 SMART serkin_6 309 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0476 632 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Lal15g0476 632 Pfam Protein kinase domain 310 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0476 632 ProSiteProfiles Protein kinase domain profile. 309 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0476 632 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 632 - -
Lal15g0476 632 SUPERFAMILY L domain-like 32 201 - -
Lal15g0476 632 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Lal15g0476 632 PANTHER PROTEIN NSP-INTERACTING KINASE 3 6 632 - -
Lal15g0476 632 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0476 Lal-Chr15 3255042 3261006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0476 67 632 Receptor kinase-like Gene Family AT1G60800 74.957 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lal15g0476 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0476 - - gmx:100806943 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0476 15 3255042 3261006 Lal15g0476 15 3255042 3261006 ECH
Lal16g0529 16 3368371 3380046 Lal15g0476 15 3255042 3261006 LSH