Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0470 CATTGCATCATTCCAAGTTTTCTCCTTTTTTACATAGAGAAGTTTCATGATCACAACATAACTATGGCTTCTTCTCTAGTTCAACTTCTTTTTTCTCTCCTCCTCCTTCTGTTGGCAACTTCATTCGTTAATGTGCTCTCATCTAAAATTTCAAGGAAATCATCAACCTACATGGAACCTTTCAAGTGTTATTCAAAGATCATTTCATGCAATGCCTCACTCTATCACATAAGCTATGGTCTCAATATAGATGAAATAGCTTCTTTTTATTCTGTTAGTCCCTCTCAAATCAAACCTATAATGCGTGGCACCAAACAAGATTACCTCATAACAGTACCTTGTTCTTGCAAAAACACCATAGACCTTAGTGGATATTTCTATGATACAACCTACAAGGTGAAACCAAATGATAAATTTTTGGACATAAAAACCATGATATATAGTGGCCAAGCATGGTCTATTAACAGTGTATTGGTTTCAAATAAGAATTTAGTGATACATATTCCATGTGGGTGTTCCAAAAGTGACTCTCAAATTGTTGTAACATATACAGTCCAGTGGAGTGATACACCAACATCTATTACTAATCTTCTAAATGCTACACTTGATGGTTTGATCAGTATGAACCAAGTTCTGAATCAGAACCCATCATTTATAGATATTGGTTGGGTGATATTTGTTCCTAGAGAATTGAATGGGCTTCCACAATCCAAAGGAAAAGGGAAAAAACACATTTGGGTAATAATCATTGGGATCTTAGCAGGTGTGGCATCACTTTCAGTTATGACAATGATCTTTCTCATTTTCGGAAGGAAAAAACCCGATGAAACTAGCGAAGACGGTCCAAACATTGTCTCCAAGAGATCAATTGCCAACAGAACTATTTCCTTAAAGAATCAATTTCATAAAGAGTCTTTGCAAGGACAATTTGAATCAGAAAGACCAGTAGTTTATACTCTTGAGGAAATCGATAATGCTACAAATAATTTCGACGAAACTCGAAAGATTGGAGCTGGAGGATATGGGGAGGTATATTTTGGAATGTTAGAGAAGGAGGTTGCTGTGAAGAAGATGAAGTCTACTAAATCTAAAGAATTCTATGCAGAACTCAAGGCATTATGTAATATCCATCATATTAATATTGTAGAGTTGTTGGGATATGCCAGTGGAGATGACCACCTTTATTTGGTGTATGAGTATGTTCCAAATGGATCTCTCAGTGAACATCTTCATGATCCATTGCTGAAAGGTCACCAGCATCTTTCTTGGTGTGCTAGGACTCAGATTGCATTGGATGCAGCAAAAGGTCTTGAATACATACATGATTACACAAAATCACGATATGTTCATCGTGATGTAAAGACTAGCAATATTCTTCTTGATGAGAAGCTCAGAGCAAAGGTGGCAGATTTTGGACTTGCAAAGCTAGTAGAACGGACAAATGATGAAGAATTCATAGCAACAAGGCTTGTCGGAACACCAGGCTACCTTCCACCAGAATCTCTGAAGGAGCTTCAGGTAACTGTAAAAACCGATGTATTTGCATTTGGAGTAGTTCTGTCAGAGTTGATAACAGGGAAACGTGCACTGTTTCGTGACAGCAAAGAAACCACAAAAATGAAATCACTTATTGCAGTAGTTAATAGTATATTCCTAGATGATGACCCAGAGGCTGCTTTACAAGAAGTCATAGATGGGAATCTTCAAAGTAACTATCCTGCAGAAGATGTCTACAAGATGGCAGAACTAGCTCAGTGGTGCATGCGCGAAGATCCAGTGGACAGACCTGAAATGAGGGAAGTTGTTGGGACATTATCACAGATTGTGATGTCCTCCATAGAGTGGGAAGCATCACTAGGTGGAGACAGCCAAGTCTTCAGCGGAGTATTTAATGGTAGATGA 1902 0.3807 HCIIPSFLLFYIEKFHDHNITMASSLVQLLFSLLLLLLATSFVNVLSSKISRKSSTYMEPFKCYSKIISCNASLYHISYGLNIDEIASFYSVSPSQIKPIMRGTKQDYLITVPCSCKNTIDLSGYFYDTTYKVKPNDKFLDIKTMIYSGQAWSINSVLVSNKNLVIHIPCGCSKSDSQIVVTYTVQWSDTPTSITNLLNATLDGLISMNQVLNQNPSFIDIGWVIFVPRELNGLPQSKGKGKKHIWVIIIGILAGVASLSVMTMIFLIFGRKKPDETSEDGPNIVSKRSIANRTISLKNQFHKESLQGQFESERPVVYTLEEIDNATNNFDETRKIGAGGYGEVYFGMLEKEVAVKKMKSTKSKEFYAELKALCNIHHINIVELLGYASGDDHLYLVYEYVPNGSLSEHLHDPLLKGHQHLSWCARTQIALDAAKGLEYIHDYTKSRYVHRDVKTSNILLDEKLRAKVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESLKELQVTVKTDVFAFGVVLSELITGKRALFRDSKETTKMKSLIAVVNSIFLDDDPEAALQEVIDGNLQSNYPAEDVYKMAELAQWCMREDPVDRPEMREVVGTLSQIVMSSIEWEASLGGDSQVFSGVFNGR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0470 633 Gene3D LysM domain 173 233 IPR036779 -
Lal15g0470 633 ProSiteProfiles LysM domain profile. 181 227 IPR018392 -
Lal15g0470 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Lal15g0470 633 ProSitePatterns Protein kinases ATP-binding region signature. 336 357 IPR017441 GO:0005524
Lal15g0470 633 SUPERFAMILY Protein kinase-like (PK-like) 315 608 IPR011009 -
Lal15g0470 633 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 41 633 IPR044812 GO:0019199|GO:0045087
Lal15g0470 633 Pfam Protein kinase domain 331 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0470 633 ProSiteProfiles Protein kinase domain profile. 330 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0470 633 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 41 633 - -
Lal15g0470 633 SMART serkin_6 330 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g0470 633 Gene3D Transferase(Phosphotransferase) domain 1 401 618 - -
Lal15g0470 633 Gene3D Phosphorylase Kinase; domain 1 299 400 - -
Lal15g0470 633 SUPERFAMILY LysM domain 181 228 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0470 Lal-Chr15 3190809 3194309 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0470 308 633 Receptor kinase-like Gene Family AT1G51940 53.754 2.69e-118 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lal15g0470 Pkinase 2.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0470 - - gmx:100800907 894.419