Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0465 ATGTCAACGATGTTGTTGTTAACACAGGAGAAACGAATCGAGGACGAGTTATCATATCCGATTATGGTGGCGGAGCGAGTCCACTCAGCGGTTCAAACCGCTAACTCATTTAAACTCGAGTGCTCTGAAGTCTGCAAAAAGGTCCACCGACTCCTCCAAATGCTCCGTACCATCGTCCGCTTCGTCACCGCCACCACCGCCGCCGCTCTCCCTCTCTATGAGCGTCCCATACGCCGCATAGCCGCTGAAACCGCTAAGAATCTCGACCGTGCCTACGCCCTCGTTCGAAAGTGCAACGGCCGCAGCATCTTCAGCCGAATCGTCAACATGGTCACCGCCGCCGACTTCCGCAAGCTCCTCTGCCACCTCGACGCCTCCGTGGGTGACATGAAATGGCTCATTAGCATCCTCAACACCGTTGGCAGTGGCGGTATTGTCCTCTCTCTCCCTCCGATCGCTAGCAACGACCCCATTCTCTCTTGGGTATGGTCTTTCATTGCTACAATTCAAATGGGTCAATTGAATGATAGAATAGAAGCTGCAAATGAACTTGCTTCATTAGCAAAAGATAGTAACAGAAACAAAATGATTATAGTTGAGGAAAATGGTGTTCCTCCTTTGTTGAAGCTCTTAAAGGAAGTGGCCTCGCCTGCGGCACAGATTGCAGCCGCGACTGCACTGTGCCACCTGGCGAATAATTTCGAGAGAGTTAGAGTGATTGTGAATAAGCTTGGAGTGCCAATTATTGTCCAAGTGTTAGGTGATTCCCATATGAGGGTTCAAACAAAGGCTGCCAATTTGATAGCCAGGATGACTGAGCATGATCCTGTTGCTCACGAGGATTTCGCGAGGGAGAATGTGGTTAGGCCGCTTGTAAGGCTATTGTCATTTGATATGTTAGTGGATGATCGGGTGGAGAAATTGGATAAGCAGAATACTCATTCTCTTGTTCAGATCAATAATGAAATGGAGAAGTCATTTGGTGGTAGATTGAGTAATCGGCTGTTAGGGAATTCTTACTCTAATTCATATTCCCATGTGGCGGGAAGTAGCCAGGGATGGAACCATTGGAAAGAGAGGGAGAATGAGGATCCAGTGCTGAAGCTTCAACTGAAGATTAGTTGTGCTAAGGCTCTGTGGATGCTTGCAAGAGGAAGCATATCAAACAGTAAGAAAATAACTGAGACCAAAGGGATGCTTTGTTTGGCTAAGCTTGTTGAGAAGGAACAAGGAGAGTTGCAGTACAATTGCTTGATGACAATAATGGAGATAACGACTGCAGCCGAATCTAATCCTGATTTTCGTCGCACGGCGTTTAAATCTAACTCTCCTCCTGCTAAAGCTGTGGTGGAACAGCTCTTGAGGATCATTAAAGATGTGGACAGTCCCATATTGCAAATTCCAGCTATAAGGTCAATTGGTTCATTGGCTAGGACATTTCCTGCTAGAGAGACCCGAGTAACTGCTTCCCTTGTATCACAACTAAGTAACAGAAACGTAGACGTAGCAGCTGAAGCAGCCTTTGCTCTTGGCAGGTTTGCTTGTCCAGATAATTTCCTGTATATGGAACATTCTAAGGCAATAATTGAGTTCATGGCAGTTCCTGCACTGATGAGACTGCTAAGGGCTAATGAAGTTACACAGTTGCATGGGCTAATTCTCCTTTGCTACCTTGCATTGCATGCTGGCAAAAGCGTGTCATTGGAACGGGCCAGGGTGTTGACGGTTCTAGAGGGTGCAGATCGAGCGGTTATTGCTCACCCCGAGTTAAGAGAATTGGTGTCAGAGGCTATAGCCCACCTCAATCTATCATGCAGGAATGAATTCTCAGATGATTTCATATTTTCATTGAAAACAAATTTAGTTAGTTTATAG 1875 0.4635 MSTMLLLTQEKRIEDELSYPIMVAERVHSAVQTANSFKLECSEVCKKVHRLLQMLRTIVRFVTATTAAALPLYERPIRRIAAETAKNLDRAYALVRKCNGRSIFSRIVNMVTAADFRKLLCHLDASVGDMKWLISILNTVGSGGIVLSLPPIASNDPILSWVWSFIATIQMGQLNDRIEAANELASLAKDSNRNKMIIVEENGVPPLLKLLKEVASPAAQIAAATALCHLANNFERVRVIVNKLGVPIIVQVLGDSHMRVQTKAANLIARMTEHDPVAHEDFARENVVRPLVRLLSFDMLVDDRVEKLDKQNTHSLVQINNEMEKSFGGRLSNRLLGNSYSNSYSHVAGSSQGWNHWKERENEDPVLKLQLKISCAKALWMLARGSISNSKKITETKGMLCLAKLVEKEQGELQYNCLMTIMEITTAAESNPDFRRTAFKSNSPPAKAVVEQLLRIIKDVDSPILQIPAIRSIGSLARTFPARETRVTASLVSQLSNRNVDVAAEAAFALGRFACPDNFLYMEHSKAIIEFMAVPALMRLLRANEVTQLHGLILLCYLALHAGKSVSLERARVLTVLEGADRAVIAHPELRELVSEAIAHLNLSCRNEFSDDFIFSLKTNLVSL 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0465 624 Gene3D - 15 136 IPR036537 GO:0007166
Lal15g0465 624 SMART arm_5 521 560 IPR000225 GO:0005515
Lal15g0465 624 SMART arm_5 475 515 IPR000225 GO:0005515
Lal15g0465 624 SMART arm_5 233 273 IPR000225 GO:0005515
Lal15g0465 624 SMART arm_5 191 232 IPR000225 GO:0005515
Lal15g0465 624 PANTHER ARMADILLO REPEAT ONLY 4 12 605 - -
Lal15g0465 624 PANTHER ARMADILLO REPEAT ONLY 4 12 605 - -
Lal15g0465 624 Gene3D - 164 436 IPR011989 -
Lal15g0465 624 SUPERFAMILY ARM repeat 174 567 IPR016024 -
Lal15g0465 624 Pfam Armadillo/beta-catenin-like repeat 191 231 IPR000225 GO:0005515
Lal15g0465 624 Gene3D - 437 616 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0465 Lal-Chr15 3164268 3166142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0465 - - aip:107643314 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0138 16 820357 821611 Lal15g0465 15 3164268 3166142 LSH
Lal15g0465 15 3164268 3166142 Lal23g1471 23 15061708 15063711 LSH