Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0460 ATGGTCGGTTCCTCAAAACCCGCTCCCAAATCTACTATCAAATTCCTCTGCAGCTACGCCGGAAAGATCCTCCCCCGGCACCCCGACGGCAAACTCCGCTACGTCGGCGGCCACAGCCGCGTCCTATCCGTTGATCGCACCATTCCATTTTCCGAATTGTTGTTGAAACTGGAAGAACTTTGTGGAACTTCCGTGAGCCACCTTCGCTGTCAGTTACCAGCGGAAGATCTCGACGCTTTAGTTTCCATAAGCTCCGATGAGGATCTCGCAAATCTCATCGAGGAATATGATCACGCGCCGTCGTTGAAGGTCAGAGTATTCCTCTCACCGCCGAGATTTCTGAACAAGGTTTCCATGACTCCGTCACCGTCTCTATCAAAGTCAACATCCTCCACATCCTCTACCTCCTCGTCAACTTCGTCGTCATCATCACATCATAGCGCTACCGGTGGCGCTTCTGGTTTGAAGTCAGTGGCGCCTATGATAAACCGCTGTGTCCATCAGATATCGCCGACGGCGGCATATCCAGTTGGTGTGGAGAAAAAAGCTGGTGGGATTGAGAGGAATATTCCTCATCCCCGCTACGGTCAAGGGAAGACTTGCCACGCTGGCCATATTTATCTGATTCACAACAGCAACCACTGGCAATAG 651 0.5177 MVGSSKPAPKSTIKFLCSYAGKILPRHPDGKLRYVGGHSRVLSVDRTIPFSELLLKLEELCGTSVSHLRCQLPAEDLDALVSISSDEDLANLIEEYDHAPSLKVRVFLSPPRFLNKVSMTPSPSLSKSTSSTSSTSSSTSSSSSHHSATGGASGLKSVAPMINRCVHQISPTAAYPVGVEKKAGGIERNIPHPRYGQGKTCHAGHIYLIHNSNHWQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0460 216 SMART PB1_new 27 109 IPR000270 GO:0005515
Lal15g0460 216 MobiDBLite consensus disorder prediction 118 151 - -
Lal15g0460 216 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 5 215 - -
Lal15g0460 216 CDD PB1_UP2 16 108 - -
Lal15g0460 216 Gene3D - 31 110 - -
Lal15g0460 216 PANTHER OS05G0427100 PROTEIN-RELATED 5 215 - -
Lal15g0460 216 MobiDBLite consensus disorder prediction 118 153 - -
Lal15g0460 216 SUPERFAMILY CAD & PB1 domains 29 112 - -
Lal15g0460 216 Pfam PB1 domain 29 110 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0460 Lal-Chr15 3125000 3129465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0460 13 108 MAP Kinase Kinase Kinase AT5G57610 52.475 9.13e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0460 - - lang:109349167 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0516 16 3284408 3287190 Lal15g0460 15 3125000 3129465 LSH