Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0450 ATGGCTGATGATAGATTGGACCCTGCCACCTCAAACCTTCTTTGTTGTGAGGACAACAACACATGTTTTGATGATGATTTAGAATGTAATGATGTTGTTGGGTCTGGGATCTTACCTTTCTGGGCCCACACAAACCTTAACTATTTCAATCAATGTCCAAGTTTTGTGTTACAGAGTGAGGAAACTGTGAGGGTTATGATTGAGAGGGAGAGGGAGCATTTACCCAGAGATGATTATCTCAACAGGATGAGGAGTGGGGAGTTGGACATGAGTTTTAGGAGAGAGGCTATTGATTGGATTTGCAAGGGACATGCTTACTATGGTTTTGGATATTTGACCTTTTGTCTGGCTGTGAACTACTTGGATCGCTTCCTATCTGTTTATGAATTGCCGAGAGGCAAAAGTTGGACAGGACAACTTTTAGCCGTTGCATGCTTATCAATTGCCGGTAAAATGGATGAGATTAAAGTGCCTCAATCTGTAGATTTGCAGGTTGGTGAACCAGATTTTTTCTTTGACGGTAAAACCATTCAAAGAATGGAACTATTGGTGTTATGCACATTGAGATGGAAAATGCATGCTTTAACTCCATGTTCCTTCATAGACTACTTCCTCAGTAAGATCACTTATGAGAAGCAACCACCTAAGCCTTCCATTTCAACATCAATACAGCTCATAGTTAGCATAATCAGAGGTATTGACTTCTTGGAATTCAGGCCTTCTGAAATTGCAGCAGCAGTGGCAATTTATGTTACCAGGGAAGTGCAGGCAAAAGATATTGATAAGGGCATTACTGGTTTTTCCATTGTTAAGGAGGAGAGAGTTCAAATGTGTGTTGAATTGATCAGAGATTTGTCCTTCAATGTTTCTGCTAATTTGGGCAGTAATAATAACTATGCACCATGTGTGCCTCAAAGCCCGGTTCGGGTGCTTGATACTAGATGCTTAAGCTTTAAGAGTGATGAATTAACAGTTGGGTCATGTCCAAATACTTCACCTAATATTCCAAATACTGAGGTCGCAAAATCAGATCGACCGTCTTATAATGGAGATTTTTCAAGTCTATGA 1068 0.4026 MADDRLDPATSNLLCCEDNNTCFDDDLECNDVVGSGILPFWAHTNLNYFNQCPSFVLQSEETVRVMIEREREHLPRDDYLNRMRSGELDMSFRREAIDWICKGHAYYGFGYLTFCLAVNYLDRFLSVYELPRGKSWTGQLLAVACLSIAGKMDEIKVPQSVDLQVGEPDFFFDGKTIQRMELLVLCTLRWKMHALTPCSFIDYFLSKITYEKQPPKPSISTSIQLIVSIIRGIDFLEFRPSEIAAAVAIYVTREVQAKDIDKGITGFSIVKEERVQMCVELIRDLSFNVSANLGSNNNYAPCVPQSPVRVLDTRCLSFKSDELTVGSCPNTSPNIPNTEVAKSDRPSYNGDFSSL 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0450 355 Gene3D - 66 281 - -
Lal15g0450 355 PANTHER CYCLINS 51 333 IPR039361 -
Lal15g0450 355 SUPERFAMILY Cyclin-like 178 285 IPR036915 -
Lal15g0450 355 MobiDBLite consensus disorder prediction 329 355 - -
Lal15g0450 355 SUPERFAMILY Cyclin-like 54 193 IPR036915 -
Lal15g0450 355 CDD CYCLIN 93 185 IPR013763 -
Lal15g0450 355 ProSitePatterns Cyclins signature. 93 124 IPR006671 -
Lal15g0450 355 SMART cyclin_7 98 186 IPR013763 -
Lal15g0450 355 Gene3D - 76 193 - -
Lal15g0450 355 SMART Cyclin_C_2 195 308 IPR004367 -
Lal15g0450 355 PANTHER CYCLIN-D4-1-LIKE 51 333 - -
Lal15g0450 355 Pfam Cyclin, N-terminal domain 63 192 IPR006671 -
Lal15g0450 355 Pfam Cyclin, C-terminal domain 196 288 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0450 Lal-Chr15 3048413 3051020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0450 58 261 Core Cell Cycle Gene Families AT5G65420 55.825 6.34e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0450 K18810 - gmx:100794010 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0506 16 3197452 3200039 Lal15g0450 15 3048413 3051020 LSH
Lal15g0450 15 3048413 3051020 Lal15g1597 15 17832566 17834735 PCT
Lal15g0450 15 3048413 3051020 Lal16g1685 16 15823677 15827138 PCT
Lal15g1597 15 17832566 17834735 Lal15g0450 15 3048413 3051020 PCT
Lal16g1685 16 15823677 15827138 Lal15g0450 15 3048413 3051020 PCT