Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g0434 ATGGATCGTTCTACTACCTCTAACTGGCTATCATTTTCACTGTCCCCTATGGAAATGCTCAGGTCCTCCCAACCTCAGTTCATTCAATACGACACCGCTTCAGCTACCACTCCTTCTCACTACTTTCTCGATAACTACTATGCCAATGTGAAGCTTTTTTTTGCAGGGTGGGGGAATCCAAAGTCTCAGCTACTATACGGTGTTCAAATGGACCAAAACGATAGCAACAAGGGACAAGCACCGCCGCAAAGCATGGCGGAGCTACCGTCCTGTCTAAACCATCCACCACCTCAGGCGGTGCCGAAACTAGAGGACTTTTTTGCAGATTCTTCATCCTCCATGATGCGTTATTCTGATAGCCAAACGGAGACTCAAGACTCTTCCCTTACCCACATCTATGAACACGGTGGCTCCGCCGCTTACTTCGGCGGCAGCGACCACCAAGATCTGAAAGCCATTGCTGGCTTCCAAGCTTTTTCTACCAACTCAGGTTCCGAGGTGGATGACTCTGGTTCTATCGGAAAATCCCAACCCACTTGTAACGAGTTCGGAACTCATTCCATTGAGTCCTCTGCACATGAGTTGGCCTTTTCTGGCAGCATCGGCGGCGCCAATGGTACTTTGTCCCTTGGCGTCGCCCAGAGCTCTGAAAAGACCATAATTGCTGCTGATTCGGATAGCACTAAGAAGATTGCCGATACCTTTGGCCAGCGAACTTCAATCTATAGAGGAGTAACTAGACACAGATGGACGGGTAGATATGAAGCGCATCTATGGGATAACAGCTGTAGAAGGGAGGGTCAGGCCAGGAAAGGGCGTCAAGGTGGATATGACAAGGAAGAGAAGGCTGCTAGAGCTTATGATTTGGCAGCTCTAAAGTATTGGGGTCCCACAGCTACCACCAACTTCCCTACTTCAAATTATTCAAAGGAATTGGAGGAGATGCAACATGTAACAAAGCAAGAGTTTATTGCATCACTGCGAAGGAAAAGTAGTGGTTTCTCTAGGGGAGCTTCCATATACAGGGGTGTTACAAGGCATCACCAACAGGGTAGATGGCAAGCAAGAATCGGCCGTGTTGCCGGAAACAAAGATCTATACTTGGGAACGTTCGCAACTGAAGAGGAAGCAGCAGAGGCATATGACATTGCAGCTATAAAGTTTAGAGGTGCAAATGCTGTAACCAACTTTGAGATGAACAGATATGATGTAGAAGCTATAATGAATAGTTCACTTCCTGTTGGCGGGGCTGCGAAACGCTTGAAGCTTTCCCTAGAATCAGAGCAGAAACAACAATCCTTGAGCAATGCTCAGCAGCATCAGCAACAACCCCACTGTGGAAACAACATGAATAGCAGCATCGATTTCTCAGCCATTCATCAGCCAATTGCTTCAATCCCTTATGGAATTCCGTATGATTCGTCCACCGAATATTATCACCACAACCTCTTTCACCATTTTTATCCTACTGCCAATGCTGGCACAGCAGAATCTGGTGTCACTTCCACCGGTGCGACTGGATTGAATGCACTGCCAGCATCTGCAGCAGCACCTGAGTTCTATATATGGCCTCATCAGTCATATTGA 1587 0.4739 MDRSTTSNWLSFSLSPMEMLRSSQPQFIQYDTASATTPSHYFLDNYYANVKLFFAGWGNPKSQLLYGVQMDQNDSNKGQAPPQSMAELPSCLNHPPPQAVPKLEDFFADSSSSMMRYSDSQTETQDSSLTHIYEHGGSAAYFGGSDHQDLKAIAGFQAFSTNSGSEVDDSGSIGKSQPTCNEFGTHSIESSAHELAFSGSIGGANGTLSLGVAQSSEKTIIAADSDSTKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEEKAARAYDLAALKYWGPTATTNFPTSNYSKELEEMQHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMNRYDVEAIMNSSLPVGGAAKRLKLSLESEQKQQSLSNAQQHQQQPHCGNNMNSSIDFSAIHQPIASIPYGIPYDSSTEYYHHNLFHHFYPTANAGTAESGVTSTGATGLNALPASAAAPEFYIWPHQSY 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g0434 528 SUPERFAMILY DNA-binding domain 240 306 IPR016177 GO:0003677
Lal15g0434 528 MobiDBLite consensus disorder prediction 427 451 - -
Lal15g0434 528 CDD AP2 240 306 IPR001471 GO:0003700|GO:0006355
Lal15g0434 528 Pfam AP2 domain 241 296 IPR001471 GO:0003700|GO:0006355
Lal15g0434 528 Pfam AP2 domain 340 390 IPR001471 GO:0003700|GO:0006355
Lal15g0434 528 Gene3D AP2/ERF domain 340 400 IPR036955 GO:0003700|GO:0006355
Lal15g0434 528 Gene3D AP2/ERF domain 241 306 IPR036955 GO:0003700|GO:0006355
Lal15g0434 528 ProSiteProfiles AP2/ERF domain profile. 241 304 IPR001471 GO:0003700|GO:0006355
Lal15g0434 528 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 7 525 - -
Lal15g0434 528 ProSiteProfiles AP2/ERF domain profile. 340 398 IPR001471 GO:0003700|GO:0006355
Lal15g0434 528 SUPERFAMILY DNA-binding domain 339 399 IPR016177 GO:0003677
Lal15g0434 528 MobiDBLite consensus disorder prediction 425 451 - -
Lal15g0434 528 CDD AP2 339 398 IPR001471 GO:0003700|GO:0006355
Lal15g0434 528 SMART rav1_2 340 404 IPR001471 GO:0003700|GO:0006355
Lal15g0434 528 SMART rav1_2 241 310 IPR001471 GO:0003700|GO:0006355
Lal15g0434 528 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL6 7 525 - -
Lal15g0434 528 PRINTS Ethylene responsive element binding protein signature 242 253 IPR001471 GO:0003700|GO:0006355
Lal15g0434 528 PRINTS Ethylene responsive element binding protein signature 380 400 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g0434 Lal-Chr15 2966736 2972045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g0434 100 528 AP2-EREBP Transcription Factor Family AT5G10510 58.893 7.50e-159 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lal15g0434 AP2 2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g0434 K09285 - gmx:100777168 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0434 15 2966736 2972045 Lal23g1083 23 12498834 12504465 LSH